Corvus cornix (hooded crow): 120410778
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Entry
120410778 CDS
T03546
Symbol
RAI1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120410778 (RAI1)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120410778 (RAI1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
120410778
NCBI-ProteinID:
XP_039415917
LinkDB
All DBs
Position
14:6778356..6787722
Genome browser
AA seq
1918 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDNLMKKTAALAGGRPYHEPAATSLPFRTHFQQQPQQQQQQQQPPALPYPKLQRQ
KLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLERPL
GSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPPQPMXGRH
HASETLHYQNLAKYQHYNQPGQTYCPGDAPPVRTPEQYYQTFSPSASHSPARSVGRSPSY
SSTPSPLMPNLENFQYSQQPLSAGAFPAGIADHSHFMPLLNPSPTDGTSPDTQSGNCKNL
QKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGIKTPARTPEQLKG
QHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYCNQNRSPA
RVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVTNERDCPRLLLS
ALSQEELASEIIVLQDAISEKADKAWANLPMLSKEATKSPFQLENHRPSLDSMVKGAWPS
QGDSSTLTEPLKLDKASGASTGKDFSEEVYEGPQVEFTATETKDVLKDTAPLAFNSKPSI
PAATSSAGATGYSCYSNTTANSVASENAMEHFEWPEESLGEACLRWKDLQATDLPKGLFP
SKLVSSCKEKKNACGLDLCDGEQPAKSEPVQDFGQQVMEEEEETLTYDEATKADSERWLQ
DTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPPKPPEMPA
VLSSSEVPVSAEETVSTVEKESSAPTPRLSGQSVILLGPAVGTETKVKSWFKSSLPHIQP
EEENGGGETSHLEAADAESASSVMVKQQLTPENVLGKMEPVSRGKSLRNKRVHCRLPEGD
GPGSTMLNPFDELPAASSVAGTCLGPDGQTEVPSKSAQSQTPRFPAEGLPARMCTRSFTA
LAEPRAPAPLEGLKAPAHQEKLGKKPGCGVKQRVAFKTRKRNSRPAPRVVQNTSDAALLV
PGLVAAEEVAGPTPLEGDAVEAGERDQRSMILRSRTKTQEVFYTKRQRGKRAGDVRLKNC
KAPKKLISNNHLPPAFKLPAPGSPHKEGKVGARMKLPKAGPGMGGKMSERPLHSLKRKST
FISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKSSGEAIPKPPL
PKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFTCKPAATAV
AATVAAYGSSLSPAGVERERXVKHQWVAVAVGDARLPKLAQHRRCPXMPVAEPLCRNPNG
RAPKGKPGGGKKLSHDGCQGEACGSTPGTQSSPNVVAKNLGLLPKKRNRKGKAAALGMAK
APLNPALPPPLPRERVAGPGGAEEAPREKKPKTEEKEAGSSDGPAEGRSAAGSARGPKRG
PTTPTTNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQPQQAPLLHPAEPEIRLKYISCK
RLRADSRAPPFAPYVRVERRGEFTTTCTVVNSPGDEARLQRGPAGPAPRPRAALPASSTM
HMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARAEGPGE
DSTVPAAAERXPRGTEGGCGGGGGKAARPEGAAEAAKQSALRSSPRGMFPSLQSCYCCDE
RTEGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAV
KAAADLKCSSCQQAGATVGCCQKGCPHTYHYACAVDTGCLLTEESFSLRCPKHKRQPV
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgt
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccatatgcgggc
tatgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattctggggacgagagcctgcaggcgtggggtggccagccacaggcgctgcccggc
ggcgtggccaagtatgaggacaacctgatgaagaagacggcggcactggcgggtgggcgg
ccataccatgagccagcagccacctcgctgcccttccggactcacttccagcagcagccg
cagcagcagcagcagcagcagcagccgcccgcactcccctaccccaagctgcagcggcag
aaactgcccaacgatgtctcctcacccatgcccttctcacagagccctcacttcgggcag
cactcccagtccttccctgcctcctccacctactcctcggtgccggggggcagccagccg
gcacactcctacaagagctgcacggcgccctcggggcagccgccactcgagcggcccctg
ggcagcgctgccagcctggcccctggccctcgcgtgcccaacctgcacggctaccagccc
aaccgcatcggctatgagcagcccccgcagccaccgccgcagcccccgcagccaccaccg
ccacagcccccgcagccaccacagcccccgcagcccccacagcccatgncagggcggcat
catgcctcagagaccctccactaccaaaacctggccaagtaccaacattacaaccagcca
ggccagacctactgcccgggcgatgcgccgcctgtgcggacgccggagcagtactaccag
accttcagccccagcgccagccactcgccggctcgctccgtcggcaggtccccgtcctac
agttccactccctccccactgatgcccaacctggagaacttccaatacagccagcagccg
ctgagtgctggtgccttcccagctggcattgctgaccacagccatttcatgccgctgctg
aacccttctcccaccgatgggacgagccccgacactcagtctgggaactgcaaaaacttg
caaaaggagaagctgcccgaaaacctgctgtcagacctgagcctgcagagccttacagca
ctcacctcccaggtggagaacatctccaacactgtccagcagctgctgctctccaaagca
gctgtgccccagaaaaagggcatcaagaccccagcaaggacccccgagcagctcaaaggg
cagcactgcagtcctgagagcagcacctactcggcagagcaggtggggacccccctgtcc
gacccactgagcaccccccagtctgtccacgctgagacacaggacactgactatctcagt
gggtcagaggaccagctggagagaagtttcctgtactgcaaccagaaccgcagtcctgcc
cgcgtcaacagcaactccaaagcaaagcctgagtcagtgtccacctgctctgtgacctcc
ccagatgacatgtccaccaaatcagatgactcattccagagtatccatgccacgctgccc
ctggagaccttcaccaagtatgtgaccaatgaacgggactgcccccgactgctcctcagc
gccctgtcccaggaggagctggcttctgagatcattgtcctgcaggatgccatcagcgag
aaggcggacaaagcctgggccaacttgcccatgctgagcaaggaggccactaagtccccc
ttccagctggagaatcaccggcccagcctggactccatggtgaagggtgcctggcccagc
cagggtgactccagcacgctcactgagcccctcaagttggacaaagcttcaggggccagc
acggggaaggactttagtgaggaggtgtatgagggtccccaggtggagttcacagccact
gaaaccaaggatgtgctgaaggacacggccccactggccttcaactccaagcccagcatc
ccggcagcgacgtcaagtgcgggagccactggctacagctgctactcaaacaccactgcc
aactcggtggcgtctgagaatgccatggagcattttgagtggccggaggagagcctgggc
gaggcctgcctgcggtggaaggacctccaggccaccgacctccccaagggcttgttcccc
agcaaactggtgagctcctgcaaggagaaaaaaaacgcctgcggcttggacctgtgtgat
ggagagcaaccagccaagagcgagccagtccaggactttggccagcaggtgatggaggag
gaggaggagacactgacctacgatgaagcaacaaaggcagacagcgagaggtggctgcag
gacacccggcactgctgctcagccggggacttcagtgagatccccatcatctcctcaccg
gatctgaaagagtcagacctggaggcagaggagtactcctctctttgtgagctggctggc
tcagagcagaagtcagtgacatacgatgcctcaccacccaagcccccagagatgccggcc
gtgctgtcctccagcgaggtgcctgtgtctgctgaggagactgtcagcacagtggagaag
gagagctcagctcccactccacgcctctctggccagtccgtcatcctgctgggccctgct
gtgggcacggagaccaaggtgaagagctggttcaaatcctccctgccccacatccagcct
gaggaggagaatggcggaggggagacgtctcacctggaggcagctgatgctgaatctgcc
tcatcggtcatggtgaagcagcaactcacacctgaaaatgtgctggggaagatggagcct
gtctcacggggcaagagcctccgcaacaagagggtccactgccggctgccagagggggat
ggccctggcagcaccatgctgaatccattcgatgagctgccagcagccagcagtgtggcc
ggcacctgcctggggccagacggacagacggaggtaccgagcaagagcgcccagagccaa
acgccccggtttccagctgagggcctgccagcacgcatgtgcacccgctccttcaccgcc
ctggccgagccccgcgcccccgccccactggagggactgaaagcccccgcacaccaggag
aagctggggaagaagcctggctgcggcgtgaagcagcgggtggctttcaaaaccaggaaa
cgcaacagccggccggcccccagggttgtccaaaacaccagtgatgctgcactcctggtg
cctggcttggtggcggcagaggaggtggcagggccgacaccactggagggggacgcggtg
gaagctggggagagggaccagcggtcgatgatcctgcgctcccggacaaagacacaggag
gttttctacaccaagcggcagaggggcaagcgggcaggtgatgtccggctgaagaactgc
aaggcacccaaaaagctcatatccaacaaccacctcccacctgccttcaagctgccagca
ccgggcagcccccacaaggagggcaaggtgggtgcccggatgaaactgcccaaagcgggg
ccgggcatggggggcaagatgtcagagcggcccctgcactcactgaagaggaagtccacc
ttcatctccccaatccccaccaaaaagaggaacctggtcctgcggagcaacagcggtggt
gtgaaggaggagaagccagagggtccccccagcctcttcaagaagatgccggtggccaag
aaggtgaaagccaagctgcctcccaagagctctggtgaagccatcccgaagccccccctg
ccaaaggaggcccctgatgtctgcatcaagatcacctcccgggcagctttccaggaggcc
actaagaccaaagtgttgcctccccgcaagggccgcggcctcaagctggaggccatcgtc
cagaagatcacctctcccaacctgaagaagttcacctgcaaaccagcagccacagcagtg
gcagccacagtggctgcctatggctcctccctgagcccagctggggtggaacgggagcgg
taggtgaagcatcagtgggtggctgtggcagtgggcgacgcgcggctgcccaagctggcg
cagcacagaagatgcccanncatgccggtggctgagccgctctgccggaaccccaatggc
cgagcaccaaaggggaagccgggtggtgggaagaagctgtcccatgatggctgccagggg
gaggcctgtgggtcaacgccggggacccagtccagccccaacgtggtggccaagaacctg
gggctcctgcccaagaagaggaaccgcaagggcaaagcggcagcgctgggcatggccaag
gcgcccctgaaccctgcactgccaccaccgctgccccgggagcgtgtggccggcccgggc
ggtgcggaggaggcgcctcgagagaagaaaccaaagactgaggagaaggaggcggggagc
agcgacggccctgctgagggacgttctgccgccgggtcggcgcggggcccgaagcgcggg
ccaaccactccaactacaaacggctactccaagcggcagcggaagcgtctgggccacggc
aaggccaaggcggtgccggcgcggtgcaagagccgcgggaagcggcggcggcagccccag
caggccccgctgctgcaccccgccgagcccgagatccggctgaaatacatctcctgcaag
cggctgcgggcggacagccgggccccgcccttcgctccgtacgtccgcgtggagcggcgc
ggagagttcaccaccacctgcaccgtcgtgaactcgcccggcgacgaggcgcggctgcag
cggggaccggccgggccggcgccgcggccgcgggcggctctgcccgcctcctccaccatg
cacatggggccggtggtgtcgaaggcgctgagcgccgcgtgcctggtctgctgcctctgc
cgcaaccccgccaactacaaggacctgggggacctctgcgggccctactaccccgaggac
tgcctgcccaagaagaaatcccggctgaaggagaaggcgcgggcggaggggcctggcgag
gactccaccgtgcccgccgcagccgagcggncgccccgcgggactgagggcggctgcggc
ggcggcggcgggaaggcggcgcggccggagggggccgccgaggcggccaagcagagcgcg
ctgcgctccagcccgcggggcatgtttccgtcgctgcagagctgctactgctgtgacgag
aggacagagggcgaggaggcggccgaaaagccccggcggcacgaatgtcacaaggccgag
tccccgccgcaggagccggcgggcgacacgcaggagcactggctgcacgaggcctgtgcc
gtatggaccgctggggttttcctggtggcggggaagctctatgggctgcaggaggctgtc
aaggcggctgcagacctgaagtgctcaagctgccagcaagcaggagccaccgtgggctgc
tgccagaaggggtgtccccacacctaccactacgcatgtgccgtcgacacaggttgctta
ttaaccgaggagagcttctctctgagatgtcccaaacataagaggcagccggtgtag
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integrated database retrieval system
