KEGG   Corvus cornix (hooded crow): 120411019
Entry
120411019         CDS       T03546                                 
Name
(RefSeq) claudin-4-like
  KO
K06087  claudin
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03272  Virion - Hepatitis viruses
ccw04382  Cornified envelope formation
ccw04514  Cell adhesion molecule (CAM) interaction
ccw04530  Tight junction
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    120411019
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    120411019
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120411019
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120411019
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ccw03037]
    120411019
   04147 Exosome [BR:ccw04147]
    120411019
Cilium and associated proteins [BR:ccw03037]
 Other cilia and associated proteins
  Stereociliary proteins
   120411019
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   120411019
  Exosomal proteins of colorectal cancer cells
   120411019
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 TMEM_230_134 DUF1218
Other DBs
NCBI-GeneID: 120411019
NCBI-ProteinID: XP_039418910
LinkDB
Position
19:615108..617325
AA seq 262 aa
MASMGMQVLGIALSVIGWLASILCCALPMWRETAFVGNNIVVAQIIWEGLWMSCVVQSTG
QMQCKVYDSLLALPQDLQAARAMVVVAIVLAILGTLLAVAGGKCTNCVEDDTAKAKVMIL
SGIIFIVAGILILIPISWSANSIVQDFYNPLVSDSQKRDLGSSLYVGWAASALLLLGGGI
LCCTCPPRGEKPYSAKFTAARSLPASTTCRSRRACLDAPAAPGSGGPPGTLNLPGWDWPG
AGAVRGRADRAAFVSPGFKPVL
NT seq 789 nt   +upstreamnt  +downstreamnt
atggcctccatggggatgcaggtgctgggcatcgccctctccgtcatcggctggttggcc
tccattctctgctgcgcgctgcccatgtggcgggagacggccttcgtcgggaacaacatc
gtggtggcccagatcatctgggaagggctgtggatgagctgcgtggtgcagagcacgggg
cagatgcagtgcaaggtgtacgactcgctgctggccctgccgcaggacctgcaagctgct
cgtgccatggtggtggtggccatcgtcctggccatcctgggcaccctgctggccgttgcc
ggcggcaagtgcaccaactgcgtggaggacgacaccgccaaagccaaggtcatgatcctc
tccggcatcatcttcatcgtcgccggtatcctcatcctcatccccatctcttggtcggcc
aacagcatcgtccaggacttctacaacccgctggtctccgactcgcagaagcgggacctg
ggctcgtccctctacgtgggctgggcggcctcggcgctgctgctgctggggggggggatc
ctgtgctgcacctgccccccccgcggagagaagccctactccgccaagttcacggctgct
cgctcgctgccagccagcactacgtgtaggagccgccgcgcctgcctggacgccccggcc
gctccggggagcgggggacctcccgggacactcaacctccccggctgggactggccgggc
gccggcgcggtgcgagggagggcagacagagccgcctttgtttcaccgggattcaagccg
gttctttag

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