Corvus cornix (hooded crow): 120411058
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Entry
120411058 CDS
T03546
Symbol
SOX12
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120411058 (SOX12)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120411058 (SOX12)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120411058
NCBI-ProteinID:
XP_039419423
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All DBs
Position
20:7501649..7505821
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AA seq
299 aa
AA seq
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MVQRGPRGRGAEARRESCAPLPARDTEPAWCKTPSGHIKRPMNAFMVWSQHERRKIMDQW
PDMHNAEISKRLGRRWQLLHDSEKIPFVREAERLRLKHMADYPDYKYRPRKKGKVGTGAA
RPRLPVKIKPSVLGRVSASRRQPAKCPPAPTPPQEPAPEVPAEDSPVVPGTAAWHPAPDG
EHSPQEPPAPLSPTTPCPEPGRSPESGSPSPMSAGSPPSSFSSSDEELEEELLGIMPGRA
SASATCGALDWSVFDKDHDLFPRGGSSHFEFPDYCTPEVTEMIAGDWLMSSISDLVFTY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcgcggcccgcggggccggggcgcggaggctcggcgggagtcctgcgctcca
ctgcccgcccgtgacaccgagcccgcctggtgcaagacgccgagcgggcacatcaagcgg
cctatgaacgccttcatggtgtggtcccagcacgagcgccgcaagatcatggaccagtgg
cccgacatgcacaacgccgagatctccaagcgcctgggccgacgctggcagctcctccac
gactccgagaagatcccctttgtcagggaggccgagcgcctgcgcctcaagcacatggct
gactaccccgactacaagtaccggcctcggaaaaagggcaaggtgggcaccggagcagcc
cgtccgcggctcccagtgaagatcaaaccctccgtgttgggccgtgtctcagccagccgc
aggcagcccgccaagtgcccaccggccccgacacccccgcaggagcccgcaccagaggtg
cccgctgaggacagccctgtggtgcctggcacggctgcctggcacccggcacccgacggg
gagcacagcccccaggagccccctgcacccctgagccctaccacaccctgcccggagcca
gggaggtccccagagagcgggtccccctctcccatgtcggctgggtcccctccctcttcc
ttcagctcctccgacgaggagctggaggaagagctgctggggatcatgcccgggcgggcg
tctgccagcgccacctgtggtgccctggactggtccgtcttcgacaaggaccacgacctc
ttcccgcggggaggctcctcgcacttcgagttcccggactattgcacgcccgaggtgacg
gagatgatagcaggggactggctcatgtccagcatctcggacttggtctttacctactga
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