Corvus cornix (hooded crow): 120411192
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Entry
120411192 CDS
T03546
Symbol
UBTF
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
120411192 (UBTF)
03021 Transcription machinery [BR:
ccw03021
]
120411192 (UBTF)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120411192 (UBTF)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120411192 (UBTF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
120411192
NCBI-ProteinID:
XP_039420457
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Position
23:complement(4415626..4433105)
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AA seq
803 aa
AA seq
DB search
MNGEAECPADLEMTAPKNQDRWSQEDMLTLLECMKNNLPSNDGSKFKTTESHLDWEKVAF
KDFSGEMCKMKWMEISNEVRKFRTLTELIMDAEEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDVPEKPKTPQQLWYNHEKKIYLKVRPDVSTATTKEVKESLGKQWSQL
SDKKRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITRSTLTKAERQLKDKFDGRP
TKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEIE
LLRFLESLPEEEQQRVLGEEKMLGSNRKGATSPASKKSSPETGKASSEKPKRPISAMFIF
SEEKRKQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAAMKAQSEKKHGSDKEE
RGKLPESPKTAEEIWQQSVIGDYLARFKNDRGKALKAMEATWNNMEKKEKLMWIKKAAED
QKRYERELSEMRAPPCSTNSTKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERM
VEIGSRWQRISQGQKDHYKKLAEEQQKQYKVHLDIWLKSLSPQERAAYKEHISNKRKSIG
KIRGPNPKMKPTMQSKSESEDDDEEEEEEEDDDEDEDDDDDNGDSSEEGGDSSESSSEEE
SEDGDECECRVSHQSQSFTPVQLKSEYAGWRWGQKPCPCLVLATGQNDEDDEDEDDEDED
DNDSEGSSSSSSSSGDSSDSDSN
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgaagccgagtgccctgcagacctggaaatgacagctcccaaaaaccaagac
cgctggtcacaggaggacatgctgaccctcctggagtgcatgaagaataacctgccctcc
aacgacgggagcaagttcaaaaccaccgagtcccacctggactgggaaaaagtggctttc
aaggacttctcaggggagatgtgcaagatgaagtggatggagatttctaacgaggtgagg
aaattccggaccctcacagagctcattatggatgctgaagagcatgtgaagaatccttac
aaaggcaaaaagctcaagaaacatcccgacttccccaagaagcccctgactccctatttc
cgcttcttcatggagaagcgagccaaatacgccaagcttcaccccgaaatgagcaacctg
gatctcaccaagatcctgtctaagaaatacaaggagcttcctgagaagaagaagatgaaa
tatatccaggacttccagagagagaagcaggagtttgagaggaacttggcgaggttcagg
gaagaccacccggatctcatccagaacgccaagaaatccgacgtccccgaaaaacccaag
accccccagcagctgtggtacaaccacgagaagaagatctacttgaaagtgcgtccagat
gtgagtacggccaccacgaaggaggtgaaagagtcgctgggcaagcagtggtctcaactc
tcggataaaaagaggctgaaatggattcataaggccctggaacagcggaaggagtacgag
gagatcatgcgggattacatccagaagcacccggagctgaacatcagcgaggaggggatc
acccgctccaccctcaccaaggccgagcggcagcttaaggacaagttcgacggacgaccc
acgaagccacccccgaatagctactccctgtactgtgcagagctgatggccaacatgaaa
gatgtgcccagcacggagcggatggtgctgtgcagccagcagtggaagctgctctcccag
aaggaaaaggatgcctaccacaaaaagtgtgaccagaaaaagaaagactatgagatcgag
ctgctccgcttcctggagagcctgcccgaggaggagcagcagcgggtgctgggcgaggag
aagatgctgggcagcaatcggaaaggggcgacgagtcctgcatccaaaaaatcctcacca
gagaccggcaaggccagctcagagaagcccaagcggcccatctcagccatgttcatcttc
tcggaggagaagcggaagcagctgcaggaggagcggccggagctgtcggagagcgagctg
acccggctcctggcccgcatgtggaacgacctttctgagaagaagaaggccaagtacaag
gcgcgggaggcggcgatgaaggcacagtcggagaagaagcacggctcggataaagaggag
cgcgggaaactgcccgagtctcccaaaactgccgaagagatctggcaacagagcgtcatc
ggggactacctggctcgtttcaagaacgaccggggcaaagcgctgaaggccatggaggcc
acttggaacaacatggaaaagaaggagaaactgatgtggatcaagaaggcggcggaggat
cagaagcgatacgagagggagctgagcgagatgcgggcccctccgtgctccaccaactcc
accaagaaaatgaagttccagggagagccaaagaaaccccccatgaacggttaccagaag
ttctcccaggagctcctgtccaacggggagctgaaccacctcccgctgaaggagcggatg
gtggagatcggcagccgctggcagcgcatctcccagggccagaaggaccactacaaaaag
ctggcagaggagcagcagaaacagtacaaggtgcacctcgacatctggctcaagagcctc
tcgccccaggagcgggctgcgtacaaggagcacatttccaacaaacgcaagagcataggg
aagatccggggtcccaaccccaagatgaagccaacaatgcagtccaagtcggagtcagag
gatgatgacgaggaggaagaggaggaggaagacgacgatgaagacgaggatgatgatgat
gacaacggcgactcgtcagaggaaggcggcgactcctcggagtccagcagcgaggaggag
agcgaggatggggatgagtgtgaatgccgagtaagtcaccagagtcaaagctttacaccg
gtgcaactgaaatcagagtatgctggatggcgctggggccagaaaccgtgtccgtgcctt
gtgctcgccaccggacagaatgacgaggatgatgaggatgaggatgatgaggatgaggat
gacaacgactcggagggcagcagcagttcctcctcctcttcgggggactcctccgactcc
gactccaactga
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