Corvus cornix (hooded crow): 120412040
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Entry
120412040 CDS
T03546
Name
(RefSeq) syntaxin-1B-like
KO
K08486
syntaxin 1B/2/3
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120412040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
120412040
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
120412040
Membrane trafficking [BR:
ccw04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120412040
Exosome [BR:
ccw04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120412040
Exosomal proteins of other body fluids (saliva and urine)
120412040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Motif
Other DBs
NCBI-GeneID:
120412040
NCBI-ProteinID:
XP_039428159
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Position
4A:complement(2784985..2785866)
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AA seq
293 aa
AA seq
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MRDRLAELQQRVAAEGDPHDDSGRFENPAFVGDDASPVGRALREAAELWRALERLEQLSE
SIDRTQQSVLCCTSEESIAREKSGLGMARAAFARQAAALQPQLGALPAAPAGGSGRAGPR
VRQTQLWLLLRRYGAVLARHYARESRYRHRLKEQIQRQAELAGINLGAQDVDLLAESPQG
PRIVGRDLEELKAKHHLGLAQARQRQLLELEAQMLELRGLFLQLEGLLAQQHGAADSVEQ
HVLRTLDYAAQTGGEVKRAGKYQRPSRLSALLTAALGLCSCCPCLPCPGRGLR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagggaccggctggcggagctgcagcagcgagtggcggccgagggggacccgcacgac
gactccgggcgcttcgagaaccccgcgttcgtcggggacgacgccagccccgtgggccgg
gcgctgcgggaggcggccgagctgtggcgggcgctggagcggctggagcagctctcggag
agcatcgacaggacgcagcagtcggtgctgtgctgcacctcggaggagagcatcgcccgc
gagaagagcggcctcggcatggcccgggccgccttcgcccgccaggccgcagccctgcag
ccccagctcggagcgctgccggcggccccggccgggggctcgggccgagcggggccccgc
gtccgccagacccagctgtggctgctgctgcgccgctacggtgccgtcctcgcccgccac
tacgcccgggagagccgctatcgacaccggctgaaggagcagatccagaggcaggcggag
ctggcaggcatcaacctgggcgcccaggacgtggatctgctggccgagagcccccagggg
cctcgcatcgtcggccgcgacctggaggagctcaaggccaagcatcacctcggcctggcc
caggcgcgccagcggcagctgctggagctggaggcgcagatgctggagctgcgcgggctg
ttcctgcagctggaggggctgctggcccagcagcacggcgctgccgacagcgtggagcag
cacgtcctgcgcaccctcgactacgcggcccagacgggcggcgaggtgaagagagccggc
aaataccagcggccgtcgcggctctcggccctgctgactgcggctctcggcctctgctcc
tgctgcccctgcctgccgtgccccggccggggtctgcgctga
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