Corvus cornix (hooded crow): 120412314
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Entry
120412314 CDS
T03546
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120412314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
120412314
03036 Chromosome and associated proteins [BR:
ccw03036
]
120412314
Spliceosome [BR:
ccw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120412314
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120412314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
PHD_2
Motif
Other DBs
NCBI-GeneID:
120412314
NCBI-ProteinID:
XP_039428635
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAAVVQNVVKLLGEQYYRDAMEQCHSYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
HRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTEQTLKKEGLISQDGSSLE
ALLRTDPLEKRSLPDPRMDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
GKGKAKGKGVGGARKKLDAAILEDRDKPYACDNSYKQKHSLKPPDRVCGKRYKNRPGLSY
HYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKT
GQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCD
DCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggttcagaatgtggtcaagctgctgggcgagcagtactaccgggacgcc
atggagcagtgccacagctacaacgcccggctctgcgccgagcgcagcgtccgcctgccc
ttcctggactcccagaccggggtggcccagagcaactgctacatctggatggagaaacgg
caccgcgggcccggtttggcggccgggcagctctactcgtacccggcgcggcgctggcgc
aagaaacgccgcgcccaccccccggaggacccccggctctccttcccttccatcaaaccc
gacacggagcagacgctgaagaaggaggggctgatctcccaggacgggagcagcctggaa
gcgctgctgaggacggatcctctggaaaaacgttccctgccagaccccaggatggacgac
gacagcctgggagagttcccggtcaccaacagccgcgcacggaagcggatcctggagccg
gacgatttcctggacgatttggatgatgaggactacgaggaggacacgcccaagaggagg
gggaagggcaaggccaagggaaaaggcgtcggaggggctcggaagaagctggacgcggcc
atcctggaggaccgggacaagccctacgcctgcgacaacagttacaaacaaaagcattcc
ttgaaacctcccgaccgagtctgcgggaagcgctacaagaaccggccggggctgagttac
cactacgcccactcccacctggccgaggaggagggggacgacaaggacgattcccagccc
cccactcccgtctcccagcgctccgaggagcagaaatccaagaagggtcccgacggattg
gcccttcccaacaattactgcgacttctgcctgggagactccaagatcaacaagaaaacc
gggcagcccgaggagctcgtgtcctgctccgactgcggccgctccggtcacccgtcgtgc
ctgcagttcacgccggtgatgatggccgcggtgaagacgtaccgctggcagtgcatcgag
tgcaagtgctgcaacatctgcggcacctccgagaacgacgaccagctgctgttctgtgac
gactgcgaccgcgggtaccacatgtactgcctgaccccgcccatgtccgagccccccgag
gggagctggagctgccacctctgcctggacctgctcaaggagaaggcgtcgatttaccag
aaccagaacagctcctga
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