Corallococcus coralloides: COCOR_00537
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Entry
COCOR_00537 CDS
T01780
Symbol
ycdC
Name
(GenBank) TetR family transcriptional regulator
KO
K22107
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccx03000
]
COCOR_00537 (ycdC)
Transcription factors [BR:
ccx03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
COCOR_00537 (ycdC)
BRITE hierarchy
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GFIT
Motif
Pfam:
TetR_C_34
TetR_N
Fibin
Motif
Other DBs
NCBI-ProteinID:
AFE10775
UniProt:
H8MEL3
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Position
complement(642855..643526)
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AA seq
223 aa
AA seq
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MAGALAEKRVVPLRARRDEDKEARRRELLDAARALFEATSFAEVKMADVAARTGLAKGTV
FLYFPTKEALFLALLDDLLIAWFAKLNGRLAEDGTWTGHQLARTVAESLEGEETFTRLLA
RAQTVLEQNVTVAQAQAFKERVLVSMGTTAALLQARLPFLTPESAVQLIRHVHALMTGLR
QMADIAPVAREVLTLPHMAPLRVDFTAELTAAITTLLRGLEPR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcactggccgagaagcgggtcgtgccgctgcgggcgcggcgggacgaggac
aaggaagcgcggcggcgggagctgctggacgcggcgcgggcgctgttcgaggccacgtcg
ttcgccgaggtgaagatggcggacgtcgcggcgcgcacgggcctggcgaaggggacggtg
ttcctctacttcccgacgaaggaggcgctgttcctggcgctcctggacgacctgctcatc
gcgtggttcgcgaagctgaacggccgcctggccgaagacggaacgtggacgggccaccag
ctggcgcgcacggtggccgagtcgctggagggtgaagagaccttcacgcggctcctggcg
cgggcgcagacggtgctggagcagaacgtcacggtggcgcaggcccaggcgttcaaggag
cgcgtgctcgtgtccatggggacgacggcggcgctgctccaggcgcggctgcccttcctc
acgccggagtccgcggtccagctcatccgccacgtgcacgcgctgatgacgggcctgcgg
cagatggcggacatcgcgcccgtggcgcgcgaggtgctgacgctgccgcacatggcgccc
ctgcgcgtggacttcaccgccgagctgacggcggccatcaccacccttcttcgcgggctc
gagccccgctga
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