Corallococcus coralloides: COCOR_01163
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Entry
COCOR_01163 CDS
T01780
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_01163 (radA)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
COCOR_01163 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
GvpD_P-loop
AAA_22
AAA_19
AAA_24
DUF7129
DUF7125
AAA_5
Zeta_toxin
NTPase_1
NAGPA
ABC_tran
Rad51
AAA
Zn_ribbon_6
AAA_30
KdpD
TIP49
Isochorismatase
RUBY_RBDX
nSTAND3
AAA_14
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AFE10079
UniProt:
H8MPD1
LinkDB
All DBs
Position
complement(1399657..1401018)
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AA seq
453 aa
AA seq
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MAKAKTHYTCQACGYQTAKWLGKCPDCGAWSSLLEETEAKVDDKRPAWGASGGASKPVKL
QDVTAETEVRRRTGITEFDRVLGGGVVGGSLVLLGGDPGIGKSTLLLAALDKLSRHGPVL
YVSGEESLRQTKMRAERLRVESEAIHLFAETDADRVLQAAEALKPQALVVDSIQTMYLPE
LGNAPGSITQVREVAGRLMAFAKRSGVPTFLVGHVTKEGSIAGPRVLEHMVDTVLYFEGE
RGHPFRLLRAHKNRFGSTNEIGVFEMKGAGLVEVADPSALFLSERPQGKSGSVVTSTLNG
TRPLLVEVQALVAPTGYGTARRTAIGVDGNRVALLAAVLEKKEEIPLVGCDLFVNVAGGM
QLSEPACDLAVCAALVSSLQNRPLDAKTLVLGEVGLAGEVRAVGQVEPRLAEAAKMGFQR
VVLPAGSARRVEKTKLQVVGVETLSEALAAMFD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgaagacgcactacacctgtcaggcctgcggctaccagacggcgaagtgg
ctcgggaagtgtcctgactgcggggcctggagctcgctcctggaggagaccgaagcgaag
gtggacgacaagcgcccggcgtggggcgcgtccgggggcgcctccaagccggtgaagctg
caggacgtgacggcggagacggaagtccgtcggcgcacgggcatcacggagttcgaccgc
gtcctgggcggcggcgtggtgggcggttcactggtgctgttgggcggcgacccgggcatc
ggcaagtccacgctgctcttggcggcgctggacaagctgtcgcggcacgggccggtgctc
tacgtgtcgggtgaagagagcctgcggcagacgaagatgcgcgcggagcgcctgcgggtg
gagagtgaggccatccacctgttcgcggagacggacgcggaccgggtgctccaggcggcg
gaggcgctgaagccgcaggcgctggtggtggactccatccagaccatgtacctgccggag
ctgggcaacgcgccgggcagcatcacccaggtgcgcgaggtggcgggccggctgatggcg
ttcgccaagcgcagcggggtgcccacgttcctggtgggccacgtgacgaaggaaggctcc
atcgcgggtccccgggtgctggagcacatggtggacacggtcctctacttcgagggcgag
cgcggccacccgttccggctcctgcgcgcgcacaagaaccgcttcggcagcaccaacgag
attggcgtcttcgagatgaagggcgcggggctggtggaggtggcggacccgtccgcgctg
ttcctctccgagcgtccgcagggcaagtccggcagcgtggtgacgagcacgctcaacggc
acgcggccactgttggtggaggtgcaggcgctggtggcgcccacgggctacggcacggcg
aggcgcacggcgattggcgtggacggcaaccgcgtggcgctgctggcggcggtgctggag
aagaaggaggagattccactggtgggctgcgacctgttcgtcaacgtggcgggcggcatg
cagttgagcgaaccggcgtgcgacctggcggtgtgcgcggcgctggtgagcagcctgcag
aaccggccgttggacgcgaagacgctggtgttgggagaggtggggctcgcaggcgaggtg
cgcgcggtgggccaggtggagccgaggctcgcggaggccgcgaagatgggcttccagcgg
gtggtgctgccagcgggcagcgcgcggcgcgtggagaagacgaagctccaggtggtgggc
gtggagaccctgagcgaagcgctggcggcgatgttcgactga
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