Corallococcus coralloides: COCOR_01336
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Entry
COCOR_01336 CDS
T01780
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccx03032
]
COCOR_01336 (hup)
03036 Chromosome and associated proteins [BR:
ccx03036
]
COCOR_01336 (hup)
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_01336 (hup)
DNA replication proteins [BR:
ccx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
COCOR_01336 (hup)
Chromosome and associated proteins [BR:
ccx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
COCOR_01336 (hup)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
COCOR_01336 (hup)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
MetW
SpoIIIAH
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AFE09103
UniProt:
H8MTL0
LinkDB
All DBs
Position
complement(1618108..1618377)
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AA seq
89 aa
AA seq
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MTKAELVEVVAAQSKLTKKQAAQILDSVFTNIGKAVKKDTRFSYPGFGTWSLRSRKARKI
RNPQTNEMMKLKASKTVGFRPAKELKNSL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggcagagctcgtggaagtggtggctgcgcagtcgaagctcacgaagaagcag
gccgcccagatcctcgacagcgtcttcaccaacatcggcaaggcggtgaagaaggacacc
cgcttcagctaccccgggttcggcacgtggtcgctgcgttcgcgcaaggcgcggaagatc
cgcaacccgcagaccaacgagatgatgaagctgaaggcgtcgaagacggtcggtttccgt
ccggccaaggagctgaagaactcgctgtag
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