Corallococcus coralloides: COCOR_01364
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Entry
COCOR_01364 CDS
T01780
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00970
Aminoacyl-tRNA biosynthesis
ccx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCOR_01364 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccx03029
]
COCOR_01364 (gatB)
Enzymes [BR:
ccx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
COCOR_01364 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
COCOR_01364 (gatB)
Mitochondrial biogenesis [BR:
ccx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
COCOR_01364 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Esterase
Motif
Other DBs
NCBI-ProteinID:
AFE08882
UniProt:
H8MTN8
LinkDB
All DBs
Position
1648965..1650410
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AA seq
481 aa
AA seq
DB search
MPLSDFQTVIGLEVHAQLLTQSKIFCGCSTAFGAEPNHHTCPVCLGMPGVLPVLNQRVVE
YAVRTGLALGCTVKPTSVWSRKNYFYPDLPKGYQITQYDQPICEWGELVIDTPSGEKTVR
VRRIHLEEDAGKSVHDASASAGQSLVDLNRAGVPLMEIVSEPDLRDADEAVEYLKALRDV
LVYLGVNDGNLEEGSFRCDANVSVMPKGSTTYGQRCELKNLNSFRFLKQAIEYEAARQVD
VIESGGKVDQETRLWDVNKGITRSMRSKEDAHDYRYFPEPDLPPLLVSDALRDSQRQSLP
ELPRAKRTRFMGEYGLPAYDARILTAERPLADFFEACAKHVSDAKKLSNWFLGELSRLLK
EEGTPISALRFTPAQLGELLATVEKGTVSANAAKDVLGEMFRTGRPPADIIAEKGLAQVS
DVGAVEAVVDDILAKNAGEVEKYKAGKKSVYGFFVGQVMKAMKGKGNPGLVNELLKKKLG
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgagcgacttccagacggtcatcggcctcgaggtccacgcgcagctgctcacg
cagtccaagatcttctgcggctgctccactgccttcggcgccgagcccaaccaccacacc
tgcccggtgtgcctgggcatgcccggcgtgctgccggtgctcaaccagcgcgtggtggag
tacgcggtgcgcacgggcctggcgctcgggtgcacggtgaagcccacgagcgtgtggagc
cggaagaactacttctatccggacctgcccaagggctatcaaatcacccagtacgaccag
cccatctgcgagtggggcgagctggtcatcgacacgccctccggtgagaagacggtgcgc
gtgcggcgcatccacctggaggaggacgcgggcaagagcgtgcacgacgcgtccgcgtcc
gcgggccagagcctggtggacctgaaccgcgcgggcgtgccgctgatggagattgtcagc
gagccggacctgcgcgatgccgacgaggcggtggagtacctcaaggcgctgcgtgacgta
ctggtgtacctgggcgtcaacgacggcaacctggaggagggcagcttccgctgcgacgcc
aacgtgtcggtgatgcccaagggctccaccacgtacgggcagcgctgcgagctgaagaac
ctcaactcgttccgcttcctcaagcaggccatcgagtacgaggccgcgcgacaggtggac
gtcatcgagtccggcggcaaggtggaccaggagacgcgcctctgggacgtgaacaagggc
atcacccggtccatgcgctccaaggaggacgcgcacgactaccgctacttcccggagccg
gacctgccgccgctgctcgtgtcggacgcgctgagggattcgcagcggcagtcgctgccg
gagctgccgcgtgcgaagcgcacgcgcttcatgggtgagtacggcctgccggcctacgac
gcgcgcatcctcaccgccgagcgcccgctggcggacttcttcgaggcctgcgcgaagcac
gtctccgacgcgaagaagctctccaactggttcctgggggagctgagccgcctgctcaag
gaggagggcacgcccatctccgcgctgcgcttcaccccggcgcagctgggcgagctgctg
gcgacggtggagaagggcacggtgtccgcgaacgcggcgaaggacgtgctcggggaaatg
ttccgcacgggccgcccgcccgcggacatcatcgcggagaagggcctcgcgcaggtcagc
gacgtgggcgccgtggaggcagtggtggacgacatcctcgcgaagaacgcgggcgaggtg
gagaagtacaaggccggcaagaagagcgtgtacggcttcttcgtgggccaggtgatgaag
gccatgaagggcaagggcaaccccggcctcgtcaacgagctgctcaagaagaagctgggc
gattag
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