Corallococcus coralloides: COCOR_01538
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Entry
COCOR_01538 CDS
T01780
Symbol
lcfB
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00061
Fatty acid biosynthesis
ccx00071
Fatty acid degradation
ccx01100
Metabolic pathways
ccx01212
Fatty acid metabolism
ccx02024
Quorum sensing
ccx04146
Peroxisome
Module
ccx_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
COCOR_01538 (lcfB)
00071 Fatty acid degradation
COCOR_01538 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
COCOR_01538 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
COCOR_01538 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ccx01004
]
COCOR_01538 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccx04147
]
COCOR_01538 (lcfB)
Enzymes [BR:
ccx01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
COCOR_01538 (lcfB)
Lipid biosynthesis proteins [BR:
ccx01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
COCOR_01538 (lcfB)
Exosome [BR:
ccx04147
]
Exosomal proteins
Exosomal proteins of breast milk
COCOR_01538 (lcfB)
Exosomal proteins of breast cancer cells
COCOR_01538 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Acyltransferase
PP-binding
AMP-binding_C
Sterile
Epimerase
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFE09187
UniProt:
H8MWW1
LinkDB
All DBs
Position
complement(1845068..1849477)
Genome browser
AA seq
1469 aa
AA seq
DB search
MATLPPLDVTQVFTGKRIVFVGTTGFVGKVTLSMLLSHYGDVLDRVYVIVRKGSAASAER
RFFDKVAPSEPFQPLRDRLGDEGAMAFIQQKCTILDGDITDPLVGLEEAQVASLTGQVHA
IVNCAGLVSFNPSLEVGLNVNTHGVKNAVALALRWSVPLIHMSTAFVVGNRSGLVFEDEP
VLGYFPKHEEMDGRDFSLEQELADAEKIVTRLREQADDKALTSLFRQKALDRLEEEGRDA
TDEKTLRLAVGRERKLWLSGELVRAGMERAQHWGWPNTYTYAKHLGEQVMAGTPGLRYSI
VRPSIVESAAHFPFPGWNEGFTTSAPLAYAGIKGQRGIPAGDHAILDIIPVDQVAGATLG
ITAHAMQVEERRVYNLASGDVNPFLASRSVELVGLYRRRYYRNRETGNTLVNSLRSRIEP
QPVSKQEFQLLSAPMLAKGAKLLKKAMDEVRPAWGAPRVQAMMDKARLALDEVESQAGSL
GGLIDLFLPFLWENRYVFRCDNTRSVYERMVPADRAKIDWAPDRIDWREYFLGTHLPGLE
KWVFPGLDEEREKRTAIPAHRDLLELFEATVHAYRHRVAFRMAAGEKEERFTFGEVHRYA
ARVGSYLMAQGIKRGDRVLLVSENRPEWAISYFGILRAGGTAVPVDPSLTEAEVVNIAKR
AAAKQCLVSEQAAEDFPGLFAALGEGVGVASLAEAMTGDPAYPDRIGPVRKSAAADDVAS
VIFTSGTTGTPKGVMLTHRNFAALVAKLAGAFDVGVGDGVLSVLPLHHTFEFSAGFLTPF
MRGAEITYIDELTSDRLGDVFETGRVTAMIGVPALWQLLHRKITQEMAAQPPLVEQALKA
LMAANGELRNRSTLNLGKLLFWPVHRKFGGRVKVLVSGGSALSEEVHQAFHELGFTMREG
YGLTEAAPVLAVSEATNKRIKGTVGKALPGIEFKILNPDNDGIGEVLAKGPNVMAGYFGD
REATEAVVKDGWLHTGDLGRMDDEGRLYLMGRAKDVIVDANGKNVYPDELEELYQEHAHI
KELSIVGLPDEAGGEKVACLCVPDFKDRPREEVRHELEEHFRKVSAGMPFYRRVKVLRFW
DGELPRTSTRKVKRKRVVEELQRLDRVAASAGRVKEKAQAAPTTGGVSDWLYPLIAEVCH
RPASDVRPDSQLIGDLGFDSLMLTEMSVALEGAGVPLPAIEDLTQVQTVEDLRKLVVASG
RRPSQETRARDIKKEAERAEEAEIPVPESVSALGRQLLSFGQKVLYGGVFDVKVTGKTFI
PQNRNFLVIANHASHLDAGLVRVVLGDQGERLVSLAARDYFFDTPLKRAWFENFTNLIPI
DRQGSLRESLRVAGEALRQGFNVLIFPEGTRSKTGELMEFKPTLGYLSLTYGVDVLPLYI
HGAYEALPKGSMFPKTKELEVHVGPALEYASLKARAQGMARSEGYRYVTHIAEEAVRALR
AGKVLDLEQVGADREFTPPARALPEGKDA
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcttcccccgctggacgtcacccaggtcttcaccggcaagcgcatcgtcttc
gtcggcaccaccggcttcgtgggcaaggtgacgctgtcgatgttgctctcccactacggc
gacgtgctggaccgggtctacgtcatcgtgcgcaagggcagcgccgcgtccgcggagcgc
cgcttcttcgacaaggtggctcccagcgagcccttccaaccgctgcgcgaccgcctgggc
gacgaaggcgccatggcgttcatccagcagaagtgcaccatcctggatggcgacatcacc
gaccccctggtgggcctggaggaggcgcaggtcgcttcgctcaccgggcaggtgcacgcc
atcgtcaactgcgcgggcctggtgtccttcaacccgtcgttggaggtgggcctcaacgtc
aacacccacggcgtgaagaacgcggtggcgctggcgctgcgctggagcgtcccgctcatc
cacatgtccaccgcgttcgtcgtgggcaaccgcagcgggctcgtcttcgaggacgagccg
gtgctgggctacttccccaagcacgaggagatggacgggcgcgacttcagcctggagcag
gagctggcggacgcggagaagatcgtgacccgcctgcgggaacaggcggatgacaaggcg
ctcacctccctcttccggcagaaggcgctggaccgcctggaagaggaaggccgcgacgcc
acggacgagaagacgctgcgcctggccgtgggccgcgagcgcaagctgtggctgtccggc
gagctggtccgcgcgggcatggagcgcgcgcagcactggggctggcccaacacgtatacg
tacgccaagcacctgggcgaacaggtgatggccgggacgccggggcttcgctactccatc
gtgcggccctccatcgtggagagcgcggcgcacttccccttccctggctggaacgagggc
ttcaccacgtccgcgccgctggcgtacgcgggcatcaagggccagcgcggcatccccgcg
ggcgaccacgccatcctggacatcatcccggtggaccaggtggcgggcgccacgctgggc
atcaccgcgcacgcgatgcaggtggaggagcgccgcgtctacaacctggcctccggtgac
gtgaacccgttcctcgccagccgctccgtggagctggtgggtctgtaccgccgccgctac
taccgcaaccgcgagacgggcaacacgctggtcaactcgctgcgctcgcgcatcgagccg
cagcccgtgagcaagcaggagttccagctgctcagcgcgcccatgctggcgaagggcgcg
aagctcttgaagaaggccatggacgaggtgcggcccgcgtggggcgcgccccgcgtgcag
gcgatgatggacaaggcccgcctcgcgctggacgaggtggagtcccaggcgggcagcctc
ggcggcctcatcgacctgttcctccccttcctctgggagaaccgctacgtcttccgctgc
gacaacacgcgctccgtctacgagcgcatggtgccggcggaccgcgccaagattgactgg
gcgcccgaccgcatcgactggcgcgagtacttcctgggcacgcacctgcccggcctggag
aagtgggtgttcccgggcctggacgaggagcgcgagaagcgcaccgccatccccgcgcac
cgcgacctgctggagctgttcgaggccaccgtgcacgcgtaccgccaccgggtggcgttc
cgcatggccgcgggagagaaggaggagcgcttcaccttcggtgaggtgcaccgctacgcg
gcccgcgtgggcagctacctcatggcccagggcatcaagcgcggcgaccgcgtcctgctg
gtgtcggagaaccggccggagtgggccatcagctacttcggcatcctgcgcgctggcggc
accgccgtgccggtggacccctcgctcaccgaagcggaggtggtcaacatcgcgaagcgc
gcagcggcgaagcagtgcctcgtgtccgagcaggccgcggaggacttccccggcctcttc
gcggcgctgggtgagggcgtgggcgtggcgagcctcgcggaggccatgacgggcgacccg
gcgtatccggaccgcattggcccggtgcggaagtccgccgccgcggacgacgtggcgagc
gtcatcttcacctccggcaccacgggcacgcccaagggcgtgatgctcacccaccgaaac
ttcgcggcgctggtggcgaagctggcgggcgcgttcgacgtgggcgtgggcgacggcgtg
ttgtccgtgctgcccctgcaccacacgtttgagttctccgccggcttcctcacgccgttc
atgcgcggcgcggagatcacgtacatcgacgagctcacgtcggaccggctgggcgacgtc
ttcgagacgggccgcgtgacggcgatgattggcgtgcccgcgctctggcagctgttgcac
cgcaagattacgcaggagatggccgcgcaaccgccgctggtggagcaggcgctcaaggcg
ctgatggcggccaacggggagctgcgcaaccgcagcactctcaacctgggcaagctcctg
ttctggccggtgcaccgcaagttcggcggccgggtgaaggtcctggtgtccggcggctcc
gcgctgtcggaagaggtgcaccaggccttccacgagctgggcttcaccatgcgcgagggc
tacggcctcacggaggccgcgccggtgctggcggtgtcggaagccaccaacaagcgcatc
aagggcacggtgggcaaggcgctgccgggcatcgagttcaagattctcaacccggacaac
gacggcattggcgaggtgctggccaagggcccgaacgtgatggcgggctacttcggggac
cgcgaggcgaccgaggccgtggtgaaggacggctggctgcacacgggcgacctgggccgc
atggacgacgagggccgcctgtacctcatgggccgcgccaaggacgtcatcgtcgacgcc
aacggcaagaacgtctacccggacgagttggaggagctgtaccaggagcacgcgcacatc
aaggagctgtccatcgtcggcctgccggatgaagccggcggcgagaaggtggcgtgcctg
tgcgtgccggacttcaaggaccgcccgcgcgaagaggtccgccacgagttggaggagcac
ttccgcaaggtgagcgcgggcatgcccttctaccggcgcgtgaaggtgctgcgcttctgg
gacggcgagctgccgcgcacgtccacccgcaaggtgaagcgcaagcgcgtggtggaggag
ctgcagcggctggaccgcgtggcggccagcgcgggccgcgtgaaggagaaggcgcaggcg
gcgcccaccacgggcggcgtgtcggactggctctatccgctcatcgcggaggtctgccac
cgcccggcgtcggacgtgcggccggactcgcagctcattggtgacctgggcttcgactcg
ctgatgctcacggagatgtccgtggcgctggagggcgcgggcgtgccgctgcccgccatt
gaagacctgacgcaggtgcagacggtggaggacctgcgcaagctggtggtggcctccgga
cgccggccttcgcaggagacgcgggcgcgcgacatcaagaaggaagccgagcgcgcggaa
gaggccgagattccggtgccggagtcggtgtccgcgctgggccggcagcttctgtccttc
gggcagaaggtgctctacggcggcgtcttcgacgtgaaggtgacgggcaagacgttcatc
ccgcagaaccgcaacttcctcgtcatcgccaaccacgccagccacctggacgcgggcctg
gtgcgcgtggtgctgggcgaccagggcgagcggctggtgtcgctggccgcgcgcgactac
ttcttcgacacgccgctcaagcgcgcgtggttcgagaacttcaccaacctcatccccatc
gaccggcagggaagcctgcgtgagtcgctgcgcgtggcgggcgaggcgctccggcagggc
ttcaacgtcctcatcttcccggagggcacgcgctccaagacgggcgagctgatggagttc
aagccgacgctgggctacctgtcgctcacctacggggtggacgtgctgccgctgtacatc
cacggcgcgtacgaagcgctgcccaagggctccatgttcccgaagacgaaggagctggag
gtccacgtgggcccggcgctggagtacgcgtcgctgaaggcccgggcgcagggaatggcg
cgctcggagggctaccgctacgtgacgcacatcgcggaggaagcggtgcgcgcgctgagg
gcgggcaaggtgctggacctggagcaggtgggcgcggaccgggaattcaccccgcccgcc
cgggccctgccggaagggaaggacgcgtga
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