Corallococcus coralloides: COCOR_01564
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Entry
COCOR_01564 CDS
T01780
Symbol
yfjP
Name
(GenBank) putative DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COCOR_01564 (yfjP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_01564 (yfjP)
Enzymes [BR:
ccx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
COCOR_01564 (yfjP)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COCOR_01564 (yfjP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AFE10938
UniProt:
H8MWY7
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All DBs
Position
1882669..1883364
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AA seq
231 aa
AA seq
DB search
MRPMPRAPVSTPVLLPDAFTPAARRALVRADPILGTLFKTIGPFRFERSPLHSPFEALAH
SIVYQQLHGRAAATIFGRVCERVGQGKGFTPQKLLALPDATLREAGLSANKLLAIQDLAR
KTVDGTVPPLARVRRMSDADLIEHLTQVRGIGQWTVEMLLIFRLGRPDILPVDDYGVRKG
FMVLHGLKEQPKPKALLAYGERWRPYRSVVSWYLWRAADKPVGTFAPPEGS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccatgccgcgcgctcctgtttccacccctgtgttgctgccggatgccttcaca
cccgccgcgcgccgcgccctcgtgcgcgcggatcccatcctgggcacgctcttcaagacg
attggcccgttccgcttcgagcggagcccgctgcacagccccttcgaggcgctggcgcac
tccatcgtctaccagcagctccacggccgcgcggcggcgaccatcttcggccgcgtctgc
gagcgggtggggcagggcaagggcttcacgccccagaagctgctcgcgctcccggacgcc
acgctgcgcgaggccgggctgtccgcgaacaagctcctggccatccaggacctggcgcgc
aagacggtggacggcacggtgccgccgctcgcgcgcgtgcgccgcatgtccgacgcggac
ctcatcgagcacctcacgcaggtgcgcggcattggccagtggaccgtggagatgctgctc
atcttccgcctgggccggccggacatcctccccgtggatgactacggcgtgcgcaagggc
ttcatggtcctgcatggcctgaaggagcagcccaagcccaaggcgctcctggcgtacggc
gagcgctggcggccctatcgcagcgtggtgagctggtacctgtggcgggcggcggacaag
cccgtgggcaccttcgccccgccggagggcagctag
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