Corallococcus coralloides: COCOR_02000
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Entry
COCOR_02000 CDS
T01780
Symbol
ygdL
Name
(GenBank) ThiF domain-containing protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_02000 (ygdL)
Transfer RNA biogenesis [BR:
ccx03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
COCOR_02000 (ygdL)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
NAD_binding_7
ELFV_dehydrog
3HCDH_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AFE10953
UniProt:
H8MHK6
LinkDB
All DBs
Position
complement(2393399..2394298)
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AA seq
299 aa
AA seq
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MNPQPAPTPTAEPEAPPASPAASNTVEPAASLAKPFKLSRRFDRTARLLGDNAMERLANA
HVVVFGLGGVGSFTAEGLVRSGVGRLTLVDHDDVCVTNTNRQLHATVKSVGKSKAELMAQ
RCQEINPQAKVEALREFYREELAETLLPAGRYDFVVDAIDNVKAKLHLLHRCVTLGLPVV
SSMGAAGRLDPTAIRVEDLSETHMDPFAKDIRKLLKRKYGVETERHTGITAVYSIETRRQ
PVPLNYDDATDGFLCVCPQDNEFHTCDHRTQIDGSVAFVTSAFGMNAAGVVVRRLASAR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcagcccgcccccacccccaccgccgagcccgaggcgccccccgcctccccg
gccgcttcgaacaccgtcgagcccgcggcctcgctggccaagcccttcaagctttcgcgc
cgcttcgaccgcacggcgcgcctgttgggcgacaacgccatggagcggctggccaacgcg
cacgtggtggtgttcggcctgggcggcgtgggcagcttcaccgcggagggcctggtgcgc
agcggcgtgggccgcctcacgctggtggaccacgacgacgtgtgcgtcaccaacaccaac
cgccagctgcacgcgacggtgaagtcggtgggcaagtcgaaggcggagctgatggcccag
cgctgccaggagatcaacccgcaggcgaaggtggaggccctgcgcgagttctaccgcgag
gagctggcggagacgctcctgcccgcgggccgctacgacttcgtggtggacgccatcgac
aacgtgaaggcgaagctgcacctgttgcaccggtgcgtgacgctgggcctgccggtggtc
agctccatgggcgcggcgggacgcctggaccccacggccatccgcgtggaggacctgagc
gagacgcacatggacccgttcgccaaggacatccgcaagctgctcaagcgcaagtacggc
gtggagacggagcgccacacgggcatcaccgccgtgtactccatcgagacgcgccggcag
ccggtgccgctcaactacgacgacgcgaccgacggcttcctgtgcgtctgcccgcaggac
aacgagttccacacctgcgaccaccgcacgcagattgacggcagcgtggcgttcgtcacc
tccgccttcggcatgaacgccgcgggcgtggtggtgcgccggctcgcttccgcgcggtag
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