Corallococcus coralloides: COCOR_02010
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Entry
COCOR_02010 CDS
T01780
Symbol
pcrA1
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03420
Nucleotide excision repair
ccx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COCOR_02010 (pcrA1)
03430 Mismatch repair
COCOR_02010 (pcrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_02010 (pcrA1)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
COCOR_02010 (pcrA1)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COCOR_02010 (pcrA1)
MMR (mismatch excision repair)
Other MMR factors
COCOR_02010 (pcrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFE09765
UniProt:
H8MHL6
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All DBs
Position
2402950..2405016
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AA seq
688 aa
AA seq
DB search
MDLSKLNPPQREAVVTLQGPLLVLAGAGSGKTRVITHRIVHLLNERPNHIMARNILAVTF
TNKAATEMKERLIHMAGPRAQGVLVCTFHAFGAEVLREDIHRLGWPRKFAIADMGDQLSI
IRRAMREKRIDDRAFDARKVLTLISKAKNSGETPQPKPEGMGDDYDLITSMVFADYQLAL
KAQGSVDFDDLLVLPARLLREHPDLHRKYTARFQYLLVDEFQDTNHAQLDLLKLLAGESR
NVCAVGDDDQCIYSWRGAEVRNILDFDRHFPGGKEVRLEQNYRSSQRVLDAANAVIAKNP
ERKDKRMWTDRKGGPLVKVVACPNDEEEARFIAHEIQKHISLGVPADDIAVLYRTNGQAH
PVEEMLREKNIAYEVVGGSEFFDRSEVKDVIAYFKVLANKLDEISLMRIVNVPSRGIGDV
TMERLHAHSRAEGVTLWTVMRRADTYDDLPAGAGGKVLEFVEMVERYREAFAQTPRLSEA
THKLLEEIGFREATRAKAVSGTAADKKLKGVDGVLASLEKFEKREGPKASLLTYLNRLSL
DTRQEEEDVPGQNKRVTLMSLHASKGLEYRLVFFIGMEEDLMPHGGMQGEAQNLEEERRL
CYVGITRAKELLYLTRSTVRVKRGKEVPRTPSRFLEDLPPDAFEVVDMDAPRQGPPDEKE
KNFFANLKERFKKPAAGGPGPGTPGRAP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggacctttcgaagctcaatcctcctcagcgcgaggccgtggtgacgctccagggcccc
ctgctcgtgctggcaggcgctggcagcgggaagacgcgggtcatcacccaccgcatcgtc
cacctgctcaacgagcggccgaaccacatcatggcccgcaacatcctcgcggtgaccttc
accaacaaggccgccacggagatgaaggaacgcctcatccacatggccgggccgcgcgcc
cagggcgtgctggtgtgcaccttccacgcgttcggcgcggaggtgctgcgcgaggacatc
caccggctgggctggccgcggaagttcgccatcgcggacatgggcgaccagctctccatc
atccgccgcgccatgcgcgagaagcgcatcgacgaccgcgccttcgacgcgcgcaaggtc
ctcaccctcatctccaaggcgaagaactccggcgagacgccccagcccaagccggagggg
atgggggacgactacgacctcatcacctccatggtcttcgcggactaccagctcgcgctc
aaggcgcagggctcggtggacttcgacgacctgctggtgctgcccgcgcgcctcttgcgc
gagcacccggacctgcaccgcaagtacacggcgcgcttccagtacctcctggtggacgag
ttccaggacaccaaccacgcccagctggacctgctcaagctgctcgcgggcgagtcgcgc
aacgtgtgcgcggtgggggatgacgaccagtgcatctactcctggcgcggcgcggaggtg
cgcaacatcctggacttcgaccggcacttcccgggcggcaaggaggtgcggctggagcag
aactaccgctcctcccagcgcgtgctggacgcggccaacgccgtcatcgccaagaacccg
gagcgcaaggacaagcgcatgtggaccgaccgcaagggcggcccactggtgaaggtggtg
gcgtgccccaatgatgaagaggaggcccgcttcatcgcgcacgaaatccagaagcacatc
tcgctgggcgtccccgcggacgacatcgcggtgctctaccgcaccaacggccaggcccac
ccggtggaggagatgctgcgcgagaagaacatcgcctacgaagtggtgggcggcagcgag
ttcttcgaccgcagcgaggtgaaggacgtcatcgcgtacttcaaggtcctggcgaacaag
ctggacgaaatctccctcatgcgcatcgtcaacgtgccctcgcggggcattggcgacgtc
accatggagcggctgcacgcgcactcgcgcgcggagggcgtgacgctctggacggtgatg
cgccgcgcggacacctatgacgacctgcccgcgggcgcgggcggcaaggtgctggagttc
gtggagatggtggagcgctaccgcgaggccttcgcccagacgccccgcctgtcggaggcc
acgcacaagctgctggaggagatcggcttccgcgaggccacccgcgccaaggccgtctcc
ggcactgccgcggacaagaagctcaagggcgtggacggggtgctcgcgtccctggagaag
ttcgagaagcgagagggccccaaggccagcctcctcacgtacctcaaccgcctcagcctg
gacacgcgccaggaggaggaggacgtcccggggcagaacaagcgcgtgacgctgatgtcc
ctgcacgcctccaagggcctggagtaccggctggtcttcttcatcggcatggaagaggac
ctgatgccccacggcggcatgcagggcgaggcccagaacctcgaggaggagcgccgcctc
tgctacgtgggcatcacccgcgccaaggagctgctctacctcacccgctccaccgtgcgc
gtgaagcgcggcaaggaagtgccccgcacgccctcccgcttcctggaggacctgcccccg
gacgcctttgaggtcgtggacatggacgcgccgcgtcaggggccgccggacgagaaggag
aagaacttcttcgcgaacctgaaggagcgcttcaagaagcccgccgccgggggaccgggc
ccgggcacccctggccgggcgccctga
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