Corallococcus coralloides: COCOR_02313
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Entry
COCOR_02313 CDS
T01780
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_02313 (truD)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
COCOR_02313 (truD)
Transfer RNA biogenesis [BR:
ccx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCOR_02313 (truD)
Prokaryotic type
COCOR_02313 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFE10555
UniProt:
H8MN14
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All DBs
Position
2784080..2785102
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AA seq
340 aa
AA seq
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MTDTGFPRLTAGVPGCGGAFKLTPEDFEVEELPAYLPSGEGTHLYLWVEKRGRDTREVVR
ALATALGVREDDIGSAGMKDRQAVTRQWLSVPANAEARLPEFALDGVRVLEAKRHGNKLR
TGHLKGNRFRLRLRGVKDLEAARESFSRLAAQGVPNYFGEQRFGRAGDNADLGRMLLLGQ
RLPKRPDRFQRKLYLSAFQSRLFNQALAARLTAGTFATALLGDVLRKEETGGLFVCEAPD
VDGPRVASFEVSPAGPMFGPKMTASKGEVAEFEARLLAEAGVTLSDFQRGGDETEGTRRP
YRVRLGAAELTVEGEDALLTFELPRGAYATEVLHELLKDG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacactggctttccgaggctgaccgcgggcgtgcccgggtgcggcggtgcattc
aagctcacccccgaggacttcgaggtggaggagttgcccgcgtacctgccgtccggcgag
ggcacgcacctgtacctctgggtggagaagcgcggccgggacacgcgcgaggtggtgcgc
gcgctggcgaccgcgctgggcgtgcgcgaggacgacatcggctccgccggcatgaaggac
cggcaggcggtgacgcggcagtggctgtccgtgcccgcgaacgcggaagcgcgcctgccg
gagttcgcgctggacggggtgcgcgtgctggaggcgaagcggcacggcaacaagctgcgc
accgggcacctgaagggaaaccgcttccggctgcggctgcgcggcgtgaaggacctggag
gcggcgcgggagtccttctcccggctggccgcgcagggcgtacccaactacttcggggag
cagcgcttcgggcgggccggggacaacgcggacctgggccggatgctgctcttggggcag
cggctgccgaagcggccggaccgcttccagcgcaagctgtacctgtccgccttccagtcg
cgcctcttcaaccaggcgctggccgcgcggctcaccgcgggcaccttcgccacggcgctc
ctgggcgacgtgctgcgcaaggaggagacgggcggcctcttcgtgtgcgaggcgccggac
gtggacggtccgcgcgtcgcctccttcgaggtgagcccggcgggcccgatgttcggcccg
aagatgaccgcctcgaagggcgaggtggcggagttcgaggcgcggctgctcgcggaggcg
ggtgtcacgctgagcgacttccagcgcggcggcgacgagacggaaggcacgcgccgtccg
taccgcgtgcggctgggcgcggcggagctcacggtggagggcgaggacgcgctgctcacg
ttcgagctgccgcgcggcgcctacgccaccgaagtgctgcacgaactgctcaaggacggc
tga
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