KEGG   Corallococcus coralloides: COCOR_02425
Entry
COCOR_02425       CDS       T01780                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ccx  Corallococcus coralloides
Pathway
ccx00300  Lysine biosynthesis
ccx00470  D-Amino acid metabolism
ccx01100  Metabolic pathways
ccx01110  Biosynthesis of secondary metabolites
ccx01120  Microbial metabolism in diverse environments
ccx01230  Biosynthesis of amino acids
Module
ccx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    COCOR_02425 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    COCOR_02425 (dapF)
Enzymes [BR:ccx01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     COCOR_02425 (dapF)
SSDB
Motif
Pfam: DAP_epimerase CntK_N
Other DBs
NCBI-ProteinID: AFE08523
UniProt: H8MPH8
LinkDB
Position
2936543..2937394
AA seq 283 aa
MDASERIFKYHGLGNDFVVLDRRRTGVDIDAEQSRWLCDRRRGIGADGVLAILPSSRGLA
RMVVHNADGSIAEMCGNGLRCAVKYLVDHSGQHPALIDVETGAGVLTCEPGYGDGGVVGV
DISMGPARLVAANLPSGTTGQPFVGAPVPGHEGLLGTAVNMGNPHLVLLDQPLEAAERLG
PGLERHPAFPDRTNVEFVRVDEDGLTVVVWERGCGLTQACGTGACASAVAAVLAKRLPSN
AWLRVTLPGGDLRIRVPDDLSDIRLRGPVAFVFEGVVALPRAR
NT seq 852 nt   +upstreamnt  +downstreamnt
gtggacgcaagcgaacgcatcttcaagtaccacggcctgggcaacgacttcgtcgtcctg
gaccggcgccgcaccggcgtggacatcgacgcggagcagtcccgctggctgtgcgaccgg
cgccggggcatcggcgcggacggggtgctcgccatcctcccgtcgtcccgcggccttgcc
cgcatggtcgtccacaacgccgacggcagcatcgcggagatgtgcggcaacggcctgcgc
tgtgcggtgaagtatctggtggaccactccggccagcaccccgcgctcatcgacgtggag
accggggccggcgtcctcacctgcgagcccggctacggcgatggcggcgtcgtcggcgtg
gacatctccatgggcccggcccggctggtggccgcgaacctgccctccgggacgaccggc
cagcccttcgtgggcgcccccgtgcccggccatgagggtctgctcggcaccgcggtgaac
atgggcaacccgcacctggtgctcctggaccagcccctggaggccgccgagcgcctgggc
cccggcctggagcggcaccccgccttcccggaccgcaccaacgtggagttcgtccgcgtg
gacgaggacggcctcaccgtcgtcgtctgggagcgcggctgcggcctcacccaggcctgt
gggacgggcgcgtgtgcgtccgccgtggcggccgtgctggcgaagcgcctgccctcgaat
gcctggctgcgcgtcacgctgccgggcggcgacctgagaatccgcgttccggacgacctg
tccgacatccggctccgaggccccgtggccttcgtcttcgaaggcgttgtcgcgcttcca
agggcccgatag

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