Corallococcus coralloides: COCOR_02664
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Entry
COCOR_02664 CDS
T01780
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCOR_02664 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccx01007
]
COCOR_02664 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_02664 (lysS)
Enzymes [BR:
ccx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
COCOR_02664 (lysS)
Amino acid related enzymes [BR:
ccx01007
]
Aminoacyl-tRNA synthetase
Class II (A)
COCOR_02664 (lysS)
Transfer RNA biogenesis [BR:
ccx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COCOR_02664 (lysS)
Prokaryotic type
Other AARSs
COCOR_02664 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
FAD_binding_6
HROB
Motif
Other DBs
NCBI-ProteinID:
AFE09278
UniProt:
H8MTX3
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All DBs
Position
3305639..3307198
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AA seq
519 aa
AA seq
DB search
MADTENKTPPGEKSGEAADSSSKEQEIYQQRLDKAEKWREAGFNPYGNGYAPKHRAADIL
ATHANHSMEDLEKDAPVYDVAGRIVAMRSFGKAAFIKLRDRSGEIQAHVKKDALGDLYEV
FKQCDLGDFVAVQGPVFRSKTGELSLSATKFVPLTKSLRPLPEKWHGLTDVEVRYRQRYL
DLVSNPDVKQVFLKRSKLVKFIRSFLDGRDFVEVETPMMHPLVTGAAARPFITHHNTYDI
DLYMRIAPELYLKRLVVGGMDRVYEINRNFRNEGISTRHNPEFTMLEFYQAYATYEDLMD
LTEEMLSEASRHVTGDSKVKYGEHVIDFGKGWKRIPMPEAIREAVPGLSDKDMVDVDRLR
HELLKTVHSEVERRAVDAMNHGELVGALFEAHVEHTLIHPTFITQYPTAVSPLARRNDQN
PEITDRFELFVAGREIANAFSELNDPLDQKGRFQAQLDAKQRGQQETMDYDEDYIRALEH
GMPPTAGEGIGIDRVAMLFTDAASIRDVILFPLLKPLAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaccgagaacaagacccccccaggtgagaagagcggcgaagcggcggactcc
agctccaaggagcaggagatctaccagcagcggttggacaaggccgagaagtggcgcgag
gccggcttcaacccctacggcaacggctacgccccgaagcaccgggccgcggacatcctg
gccacgcacgccaaccactccatggaggacctggagaaggacgcgcccgtctacgacgtc
gccggccgcatcgtggccatgcgctcgttcggcaaggccgccttcatcaagctgcgcgac
cgctccggggaaatccaggcgcacgtgaagaaggacgcgctcggggacctctatgaggtc
ttcaagcagtgcgacctgggcgacttcgtcgctgtgcagggccccgtcttccgcagcaag
acgggcgaactgtccctgtccgccacgaagttcgtgcccctcaccaagtccctgcgcccc
ctgccggagaagtggcatggcctcacggacgtggaggtccgctaccgccagcgctacctg
gatctcgtctccaacccggacgtgaagcaggtcttcttgaagcgcagcaagttggtgaag
ttcatccggagcttcctcgacgggcgcgacttcgtcgaggtggagaccccgatgatgcac
ccgctggtgacgggtgcggcggcgcggccgttcatcacgcaccacaacacgtacgacatc
gacctctacatgcgcatcgcgcccgagctctacctgaagcggctcgtggtgggcggcatg
gatcgcgtctacgaaatcaaccgcaacttccgcaacgagggcatcagcacccggcacaac
ccggagttcacgatgctggagttctatcaggcgtacgccacgtacgaagacctgatggac
ctcacggaggagatgctctcggaggcctcccgccacgtcaccggcgactccaaggtgaag
tacggcgagcacgtcatcgacttcggcaagggctggaagcgcatccccatgccggaggcc
atccgggaagccgtccccggcctgtccgacaaggacatggtggacgtggaccgcctgcgc
catgaactgctcaagacggtgcactcggaggtggagcgccgcgccgtggacgccatgaac
cacggtgagctggtgggcgccctcttcgaggcccacgtcgagcacacgctcatccatccc
accttcatcacccagtatcccaccgccgtctccccgctcgcccgccgcaacgaccagaac
ccggaaatcacggaccggttcgagctcttcgtcgcgggccgggaaatcgccaacgccttc
tccgagctgaacgaccccctggaccagaagggccgcttccaggcccagctggacgcgaag
cagcggggccagcaggagaccatggactacgacgaggattacatccgcgccctcgaacac
ggcatgccgcccacggccggtgaaggcatcgggattgatcgcgtcgccatgttgttcacg
gacgccgccagcattcgtgacgtgattctcttccccctcctcaagccgctggcgaagtag
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