Corallococcus coralloides: COCOR_03070
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Entry
COCOR_03070 CDS
T01780
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
COCOR_03070 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccx03021
]
COCOR_03070 (rpoA)
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_03070 (rpoA)
Enzymes [BR:
ccx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
COCOR_03070 (rpoA)
Transcription machinery [BR:
ccx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
COCOR_03070 (rpoA)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
COCOR_03070 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AFE10227
UniProt:
H8N1P7
LinkDB
All DBs
Position
3763221..3764243
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AA seq
340 aa
AA seq
DB search
MADTFVAKNWRDLIKPRRMEVDQDSLSPTYGKFVAEPLERGFGTTLGNSLRRVLLSSLQG
AAITSVKIEGVDHEFTTIPEVAEDVTDVVLNLKEVLLRMHTNETKTLRIEVEGPKEVKAG
DLIADQDVEILNPGHHICTVSEGGKVRMELTCRRGRGYVPASTNKVPGAPIGTIPIDSLF
SPIRKVNYQVTNARVGQVTDYDKLSLEVWTDGSVVPQDAVAYAAKIIKEQLTVFVNFDET
EEPVVAEAPKEEAKLNENLFRSVDELELSVRSANCLQQANIKSIGDLVQRTEAEMLKTKN
FGRKSLKEIKEILAEMGLSLGMKLENWPPKNAPAPAAPKA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgtttgttgcgaagaactggcgcgacctcatcaagccgcgccgcatggaa
gtggaccaggactcgctgagccccacgtacggcaagttcgtggcggagccgctggagcgc
ggcttcgggacgacgctgggcaactcgctgcggcgggtgctgctgtcgtcgctgcagggc
gcggccatcacctccgtgaagattgaaggcgtggaccacgagttcacgaccatccccgag
gtggccgaggacgtcacggacgtcgtgttgaacctgaaggaggtcctcctccggatgcac
acgaacgagacgaagacgctgcgcatcgaggtggaaggccccaaggaagtgaaggcgggc
gacctcatcgcggaccaggacgtggagattctgaatccgggtcaccacatctgcaccgtg
tccgagggtggcaaggtgcgcatggagctgacgtgccgccggggccggggctacgtgccg
gcgtccaccaacaaggtgccgggtgcgcccatcgggaccatccccatcgactcgctcttc
tcgcccatccgcaaggtgaactaccaggtcaccaacgcgcgcgtcggtcaggtcacggac
tacgacaagctgtcgctcgaggtctggacggacggctccgtggtgccgcaggacgcggtg
gcgtacgcggcgaagatcatcaaggagcagctcacggtcttcgtgaacttcgacgagacc
gaggagccggtcgtcgccgaggcgccgaaggaagaggccaagctcaacgagaacctgttc
cgctcggtggacgaactggagctgtcggtgcgttcggccaactgcctgcagcaggcgaac
atcaagtccatcggtgacctggtccagcgcaccgaggcggagatgctcaagacgaagaac
ttcggccgcaagtccttgaaggagatcaaggagatcctcgcggagatgggcctgtccctg
ggcatgaagctggagaactggccgccgaagaacgcgccggctcctgcggcccccaaggcc
tag
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integrated database retrieval system
