Corallococcus coralloides: COCOR_03218
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Entry
COCOR_03218 CDS
T01780
Symbol
rluD3
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccx03009
]
COCOR_03218 (rluD3)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
COCOR_03218 (rluD3)
Ribosome biogenesis [BR:
ccx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
COCOR_03218 (rluD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFE10169
UniProt:
H8MGF6
LinkDB
All DBs
Position
3939018..3940028
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AA seq
336 aa
AA seq
DB search
MASPDTREHRALPEARGERLDAYLARAFPDLTRSRLQGLIADGHVLSDGKPAKAAQRLRG
GEVLALHVPAPVAAIPQAEALPVSVLHEDRDLVVVDKAAGMVVHPGAGHASGTLVNALLH
RVKDLAGVGGELRPGIVHRLDKDTTGCLVVAKHEQALVALQKAFKTREVQKTYLALVHGV
PPAEGRIETLYGRHPIHRQKFTGKVKEGKPAITLFRVREAFDGAALVEVDLLTGRTHQIR
VHLAEAGHPLLCDALYGAGRKAKGAVAEAQEALGRQALHAWRLAFEHPRTHKALDLEAPL
PEDFQKALTRLREASVPPGPPTKAKPAAKKATGRKR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtggcctcacccgacacgcgcgagcaccgcgccctccccgaagcccggggcgagcgcctg
gatgcgtacctggcccgcgcgttcccggacctcacccgctcccgcctccagggcctcatc
gcggacggccacgtgctgtccgacggcaagcccgccaaggccgcgcagcgtctgcgcgga
ggcgaggtgctggccctccacgtccccgcgcccgtcgccgcgattccgcaggcggaagcc
ctgcccgtgtccgtgctgcacgaggaccgggacctcgtcgtcgtggacaaggccgccggc
atggtggtgcacccgggcgcgggccacgcgtccggcacgctcgtcaacgcgctcctgcac
cgcgtgaaggacctggccggcgtgggcggcgagctgcgccccggcatcgtccaccggctg
gacaaggacaccaccggctgcctcgtcgtggccaagcacgagcaggccctggtggcgctc
cagaaggccttcaagacgcgcgaggtccagaagacgtacctggccctggtgcacggcgtg
ccgcccgcggaaggccgcatcgagacgctctacggccgccaccccatccaccgccagaag
ttcaccggcaaggtgaaggagggcaagcccgccatcaccctgttccgcgtgcgcgaggcc
ttcgacggcgccgcgctggtggaggtggacctgctcaccggccgcacgcaccagatccgc
gtccacctggcggaggccgggcacccgctcctgtgcgacgcgctctacggcgccggccgc
aaggcgaagggcgcggtcgcggaggctcaagaggcgctgggccgtcaggcgctgcacgcg
tggcgcctggccttcgaacaccctcgcacccacaaggcgctggacctggaagcccccctc
ccggaggacttccagaaggcgctcacgcgcttgcgcgaggcgagcgttcccccggggcct
cccacgaaggcgaagcccgcggcgaagaaggctacaggccggaaacgctga
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