Corallococcus coralloides: COCOR_03259
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Entry
COCOR_03259 CDS
T01780
Name
(GenBank) rhomboid family protein
Organism
ccx
Corallococcus coralloides
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
TPR_16
TPR_14
TPR_19
TPR_6
DUF1751
Motif
Other DBs
NCBI-ProteinID:
AFE05112
UniProt:
H8MGJ7
LinkDB
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Position
3995659..3997668
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AA seq
669 aa
AA seq
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MVFLLPLGVDGATLGRRPWVSVSIAALCAVAFFITWVVPANPGGVGEGEVRELIQETLAH
PDLELPPGCNSLLSEHGQALLARLKEEVEAPARGVDVNALQARLDAHCESVLESRDSGLL
NRLGLVPARGLLQWGWLTYMFLHLGWMHLLGNLLFFYVVGLLLEDAWGRPLFAAFYGVGG
LMAGIAHFALDTQSQTLMVGASGAVAACMGAFCLRFATRKVRVGYLFWLLKIWRGTFGVP
GWLWAGLWFGNQVLDFVVLGNNTGVAVMAHIGGFAFGFVAASALRVTRLEERFVAPAIAA
REGGWVADPRMLEAQTALDGGDREKARATFQRILADHPDNTEALLSLGRMELEDGRGPSG
SARVEKALQLLVGHDVHEPLWHAVDQLGELFPVDRLRPGVAWRVAQGMDQEGAPSNSVGM
AESLYAAAGKGTGTMAVRALIRAAELRLARRDAPEKAAEYLTRAKPMATGDAAALAERIG
QLEVEAARMDARMKDRGIALDTESAAPRTRAVAALAPESPGASTLPPRIIPCRILGLSDK
ALMVESQGGQRRSLSVTEVMAVAVGMLPIAGPEGAAPRQTVLTDLVVSWGDLERGPTVLR
IPAAGLGLPERYPGLAPREAYARFLAALLEHSSANALPDAPTLAEGRYPRFANEGELTAH
YYGQVASAA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcctgctcccgcttggggtggacggtgcgacgctgggccgtcgcccctgggtc
tccgtctccatcgccgcgctctgtgccgtggccttcttcatcacctgggtcgtgcctgcg
aacccgggcggggtgggtgagggtgaggttcgcgagctgatccaggagacgctcgcccat
cccgacctggagctgcccccgggctgcaactcgctcctcagtgagcacggccaggcgctg
ctagcccggctgaaggaggaggtggaggcgccggccaggggcgtggatgtgaatgcgctc
caggcgcggctcgacgcgcactgtgagagcgtcctggagtcgagggattcgggcctgctc
aaccgcctggggctcgtgcccgcgcgggggctgctgcagtggggctggctgacgtacatg
ttcctgcacctcgggtggatgcacctgctggggaacctgctgttcttctacgtcgtgggg
ttgctgctcgaggacgcgtggggccggccgctgttcgcggccttctacggggtggggggc
ctgatggcggggattgcccacttcgcgctcgatacccaatcccagacattgatggtcggt
gcctccggagcggtcgcggcgtgcatgggcgcgttctgtctgcgcttcgccacgcgcaag
gtccgcgtgggctacctcttctggctcctgaaaatctggcgcggcaccttcggtgttccg
ggctggctgtgggcgggcctctggtttggcaaccaggtgctcgactttgtcgtcctgggt
aacaacacgggcgtcgcggtgatggcgcacatcggcggattcgcctttggcttcgtcgcg
gccagcgcgctgcgcgtgacgcggctggaggagcgcttcgttgcccccgccatcgccgcg
cgtgaggggggctgggtggcggaccctcgcatgctggaggcccagacggcactggacggc
ggcgaccgggagaaggctcgggcgaccttccagcgcatcctggcggaccatccggacaac
accgaggcgctgctctccctggggcggatggagctggaggacggccgggggccttccggc
tccgcgcgggtggagaaggcactgcagctgctggtcgggcatgacgttcatgaaccgctc
tggcacgcggtggaccagctgggagagctgttccccgtggaccggctgcgcccgggtgtc
gcctggcgcgtggcgcaggggatggaccaggagggggccccctccaactcagtggggatg
gccgagtcgctctacgccgcggccggcaagggcaccggcaccatggcggtgcgcgccctg
attcgcgccgcggagctgcggctggcgcgccgggacgccccggagaaggcggcggaatac
ctgacccgggcgaagccgatggcgactggcgatgccgccgcgttggcggagcggatcggc
cagctggaggtggaggcggcgcggatggacgcgcggatgaaggaccggggaatcgccctg
gacacggagtccgccgcgccaaggactcgcgccgtcgcggccctggcgcccgagtcgcct
ggggcctccacgctgcccccgcgaatcatcccctgtcgcatcctggggctgtccgacaag
gccctgatggtggagtcccagggcggacagcgccggtcgctgtccgtcacggaggtcatg
gcggtggccgtgggcatgctgcccatcgccgggcccgaaggggcggccccgcggcagacg
gtgctcaccgacctggtggtgtcctggggggacctggagcgagggccgaccgtgctgcgc
atcccggccgccgggctcggactgccggagcgctatcccggcctcgcgccgagagaggcc
tacgcgcgcttcctggccgcgctgctggagcactccagcgccaatgccctgccggacgca
cccacactggccgagggccgctacccgcgcttcgccaacgagggcgagctcacggcgcac
tactacggacaggtggcctcggcggcttga
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