Corallococcus coralloides: COCOR_03328
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Entry
COCOR_03328 CDS
T01780
Symbol
ygeR
Name
(GenBank) cell wall endopeptidase
KO
K06194
lipoprotein NlpD
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
COCOR_03328 (ygeR)
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
Biotin_lipoyl_2
Ldh_2
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AFE10956
UniProt:
H8MHW2
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Position
4102260..4103144
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AA seq
294 aa
AA seq
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MLLAAALFSGCVGTQAASSSQLDTAGVRPEQTSNGKPLSFALRPTHEEPELVAVRHRVAA
GETMYRIAKTYGITVDELAQANGIKDPRELAVGKELMIPGSEPPKYGDPGPLSDEEPELV
LSKPGQAPVSTPRRPVPAVSRREEPPRARVVSGRPGAPSRPKLATQGMLDWPLRGVLYGR
FGKKGKEPHDGIDLAAPAGTPIKTAQEGTVLYAGEQKGYGLIVIVEHAAPLITLYAHNRD
LRVKTGQKVRRGQVIATVGESGRTSGPHVHFEVRVDGKPADPLEYLGVMPSAND
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgttgctcgcggccgcgctgttcagcggctgcgtgggcacccaggccgcttcctcctcg
cagctggacacggcgggcgtgcggcctgagcagacgagcaacggcaagccgctgtccttc
gcgctgaggcccacgcacgaggagccggagttggtggcggtgcgccaccgcgtggctgcg
ggcgagacgatgtaccgcatcgccaagacgtacggcatcacggtggacgagctggcccag
gccaacggcatcaaggatccgcgtgagctggcggtgggcaaggagctgatgattccgggc
agtgagccgccgaagtacggcgacccggggccgctgtccgacgaggagccggagctggtg
ctctccaagccagggcaggcgccggtgtccacgccgcgccgcccggtgccggcggtgtcg
cgccgcgaggagccgccgcgagcgcgcgtggtgtcggggcgtccgggcgcgccgtcgcgg
ccgaagctcgcgacgcaggggatgctcgactggccgctgcgaggcgtgctgtacggccgc
ttcggcaagaagggcaaggagccgcacgacggcatcgacctggcggcgcccgcgggcacg
cccatcaagacggcgcaggagggcacggtcctctacgcgggcgagcagaagggctacggc
ctcatcgtcatcgtggagcacgcggcgccgctgatcacgctctatgcgcacaaccgagac
ctgcgcgtgaagacggggcagaaggtccggcgcgggcaggtcatcgccacggtgggcgag
tccggccgcacgtccggcccgcacgtgcacttcgaggtgcgcgtggacggcaagccggcg
gatccgctggagtacctgggcgtgatgccgtccgcgaacgactag
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