Corallococcus coralloides: COCOR_03717
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Entry
COCOR_03717 CDS
T01780
Symbol
lpdA
Name
(GenBank) alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00010
Glycolysis / Gluconeogenesis
ccx00020
Citrate cycle (TCA cycle)
ccx00260
Glycine, serine and threonine metabolism
ccx00280
Valine, leucine and isoleucine degradation
ccx00310
Lysine degradation
ccx00380
Tryptophan metabolism
ccx00620
Pyruvate metabolism
ccx00630
Glyoxylate and dicarboxylate metabolism
ccx00640
Propanoate metabolism
ccx00670
One carbon pool by folate
ccx00785
Lipoic acid metabolism
ccx01100
Metabolic pathways
ccx01110
Biosynthesis of secondary metabolites
ccx01120
Microbial metabolism in diverse environments
ccx01200
Carbon metabolism
ccx01210
2-Oxocarboxylic acid metabolism
ccx01240
Biosynthesis of cofactors
Module
ccx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ccx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ccx_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ccx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
COCOR_03717 (lpdA)
00020 Citrate cycle (TCA cycle)
COCOR_03717 (lpdA)
00620 Pyruvate metabolism
COCOR_03717 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
COCOR_03717 (lpdA)
00640 Propanoate metabolism
COCOR_03717 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COCOR_03717 (lpdA)
00280 Valine, leucine and isoleucine degradation
COCOR_03717 (lpdA)
00310 Lysine degradation
COCOR_03717 (lpdA)
00380 Tryptophan metabolism
COCOR_03717 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
COCOR_03717 (lpdA)
00670 One carbon pool by folate
COCOR_03717 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccx04147
]
COCOR_03717 (lpdA)
Enzymes [BR:
ccx01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
COCOR_03717 (lpdA)
Exosome [BR:
ccx04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
COCOR_03717 (lpdA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
HI0933_like
FAD_binding_2
GIDA
Lys_Orn_oxgnase
NAD_binding_8
FAD_binding_3
Thi4
3HCDH_N
DAO
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
AFE09247
UniProt:
H8MPQ4
LinkDB
All DBs
Position
4617421..4618818
Genome browser
AA seq
465 aa
AA seq
DB search
MAETFDVVIIGSGPGGYVGAIRAAQLGLKTAIIEKDKRLGGTCLHRGCIPTKSLLWTASL
FHHIKESSDFGIDVANPTVNWANAQKHKDKVVTKGANGIDFLMKKNKITVVKGHGRIAGK
GKVEVTAEDGSKQTLETKNIIIATGSVPKSLPNVAVDHKRVMNSDSILTIDRIPKSIIVL
GAGAVGCEFASVFNHVGSKTAIVEYMPALLPIEDADISKELDKIFRRRGIDVHTGSAVQK
VEHTADGVRVTMKVGEETKTLEAEILLSAVGRAPVTEDVGLNKTSIQVDRGFIKVDTLCR
TSEPNVYAIGDVIPTPMLAHMASAECVMVVEHIAGKNPAPINYDLTPSATYCYPEVASVG
LTEKKAKERGYDVKVGIAPFGAVTKSAISNESVGLIKIVSDKKYDEVLGIHIIGPHATEL
LAEACVAMKLEITTEELAHTIHAHPTLSEIMHEGAEATLGHPLHF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagactttcgacgtggtgatcatcggctcgggtcctggcggctatgtgggcgcc
atccgcgcggcccagctcgggctgaagacggccatcatcgaaaaggacaagcgcctgggt
ggcacgtgtctgcaccgcggctgcatccccaccaagtcgctcctgtggacggcgtcgctc
ttccaccacatcaaggagtcgtccgacttcggcatcgacgtggcgaacccgaccgtgaac
tgggccaacgcccagaagcacaaggacaaggtcgtcacgaagggtgccaacggcatcgac
ttcctgatgaagaagaacaagatcaccgtggtgaagggccacggccgcattgccggcaag
ggcaaggtggaggtcacggcggaggacggctccaagcagaccctggagacgaagaacatc
atcatcgccacgggctcagtgcccaagtccctgccgaacgtggcggtggaccacaagcgg
gtgatgaacagtgactccatcctgaccatcgaccgcatccccaagagcatcatcgtcctg
ggcgcgggcgcggtgggctgcgagttcgcctccgtgttcaaccacgtgggcagcaagacg
gccatcgtggagtacatgcccgcgctgctccccatcgaggacgcggacatctccaaggag
ctggacaagatcttccgccgccgcggcatcgacgtgcacacgggctccgcggtgcagaag
gtggagcacacggcggacggcgtgcgcgtcaccatgaaggtgggcgaggagaccaagacg
ctggaggccgagatcctcctgtcggcggtgggccgcgcgcccgtcaccgaggacgtgggc
ctcaacaagacgtccatccaggtggaccgcggcttcatcaaggtcgacacgctgtgccgc
accagcgagcccaacgtctacgccattggcgacgtcatccccacgccgatgctggcgcac
atggcctccgccgagtgcgtgatggtggtggagcacatcgccgggaagaaccccgcgccc
atcaactacgacctgaccccgtccgccacgtactgctaccccgaggtggcgtccgtgggc
ctcacggagaagaaggccaaggagcgcggctacgacgtgaaggtgggcatcgcccccttc
ggcgccgtcaccaagtcggccatctccaacgagtcggtcggcctcatcaagatcgtctcc
gacaagaagtacgacgaggtgctgggcatccacatcatcgggccgcacgccacggagctg
ctcgccgaggcctgcgtcgcgatgaagctggagatcaccaccgaggagctggcccacacc
atccacgcgcacccgacgctctccgaaatcatgcacgagggcgccgaggccacgctgggt
cacccgctgcacttctag
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