Corallococcus coralloides: COCOR_03890
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Entry
COCOR_03890 CDS
T01780
Symbol
truA1
Name
(GenBank) putative tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_03890 (truA1)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
COCOR_03890 (truA1)
Transfer RNA biogenesis [BR:
ccx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCOR_03890 (truA1)
Prokaryotic type
COCOR_03890 (truA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Jag_N
Motif
Other DBs
NCBI-ProteinID:
AFE10552
UniProt:
H8MSK7
LinkDB
All DBs
Position
complement(4827973..4828833)
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AA seq
286 aa
AA seq
DB search
MARSSPKRIPAVLWTWYRGGNFRGFQRQVEGPTVQDALENALEQAGSPATVMPSGRTDRG
VHARMQVISLRLNEDVSLESLPAKLAPHLSPDVGLCIAKRPPGAFHAQWSASGKEYRYHL
TLGTPPPEAWRPYALDVAADETLQAGHRVTPEKLGALLERAVGTRDFTAFHERSSPQKPR
TLQSATLRELGGGLFEARLEGDGFARYQVRYLVGSALKVAAGLLSEEQWHAALDSGTALA
GFKAPAHGLVLWEVRYPSAVDPFGPGERLHPPGLPDAPPFTGAPPG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtggccaggtcctcgcccaaacgaattcccgccgtactgtggacttggtatcgcggtgga
aacttccgcggcttccagcgccaggtggaaggtcccacggtccaggacgcgctcgaaaac
gccctggagcaggcaggctcacccgccacggtgatgccgtccgggcgcaccgaccggggc
gtccacgcgcggatgcaggtcatcagcctgcgcctcaatgaggacgtgtccctggagtcg
ctgcccgcgaagctcgcgccccacctgtccccggacgtggggctgtgcatcgcgaagcgg
ccgccgggcgcgttccacgcccagtggagcgcgagcggcaaggagtaccgctaccacctg
acgctgggcactccgcccccggaagcctggaggccgtacgcgctggatgtggcggcggac
gaaaccctccaggcaggccaccgggtgacgccggagaagctgggggcgctgctcgagcgc
gccgtgggcacgcgggacttcaccgcgttccacgagcgctccagtccccagaagccgcgc
acgctccagtccgccaccctgcgggagctgggcggagggctcttcgaggcgcggctggaa
ggagacggcttcgcgcgctaccaggtgcggtatctggtgggcagcgcgctgaaggtggcc
gcggggctcctgtccgaggagcagtggcacgcggcgctggattcggggaccgccctggcc
ggcttcaaggccccggcgcatgggctggtgttgtgggaggtccgctatccttccgcggtg
gaccctttcgggcccggcgagcgcctccacccgcccggtctgcccgacgcgccacccttc
acgggagcgccgccgggctga
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