Corallococcus coralloides: COCOR_03899
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Entry
COCOR_03899 CDS
T01780
Symbol
nla6
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
KO
K07713
two-component system, NtrC family, response regulator HydG
Organism
ccx
Corallococcus coralloides
Pathway
ccx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COCOR_03899 (nla6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ccx02022
]
COCOR_03899 (nla6)
Two-component system [BR:
ccx02022
]
NtrC family
HydH-HydG (metal tolerance)
COCOR_03899 (nla6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
HTH_29
HTH_30
AAA
HTH_23
AAA_16
HTH_50
AAA_22
Torsin
HTH_Tnp_ISL3
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AFE09610
UniProt:
H8MSL6
LinkDB
All DBs
Position
4838761..4840200
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AA seq
479 aa
AA seq
DB search
MGSARILAVDDERETCEALAEMLSAWGHKVETAFDGHDALRKAGEFRPDVVLSDLAMPET
DGLWLLRNLRDELPDCPVVFLTGRGTIDTAVESIREGAYDFIVKPLDTARLKVCIDRALE
KKETMREVQTLRRRLKQLGSTDLIAGSTGMRKVIEMIEKVAPSKASVSISGESGTGKEVV
ARTVHNLSLRRDKPFIAINCASIPATLIESELFGHERGAFTGADQRRPGVFEMAHGGTLF
LDELGEIPIDLQAKLLRVLEEGRLRRLGGKVEIEVDVRVLSATNRDLKQEIKNQRFREDL
YFRLNVFQLHLPPLRERRDDVPILVQHFVDKFRGDSAKRVSGVHPDAMEVLKNYDWPGNI
RELRNAVERAVILCDGELITREHLPPDMAGKSPERHTFKLPFGLSLDAVEREYILGSLQR
NGNNKARTAEVLGVSEKTLYNKLNRYAAENRAQGAPGGGSPLGGQGNDGPMSASSFLTR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
ttgggcagcgcacgaatcctggccgtggatgacgaacgtgagacctgcgaggccctggcg
gagatgttgtccgcctggggtcacaaggtcgaaacggcgttcgacgggcatgacgccctc
cgcaaggccggtgagttccggcccgacgtcgtcctgtcggacctcgccatgccggagacg
gatggcctgtggctgttgcgcaacctgcgcgacgagctgccggattgcccggtggtgttc
ctcaccggccgcggcaccatcgacaccgccgtggagtccatccgcgagggcgcctacgac
ttcatcgtgaagccgctggacaccgcgcggctcaaggtctgcatcgaccgcgcgctggag
aagaaggagaccatgcgcgaggtgcagacgctccggcgccgcctcaagcagctgggctcc
acggacctcatcgccggctccaccgggatgcgcaaggtcatcgagatgatcgagaaggtg
gccccctccaaggccagcgtctccatcagcggtgagtccggcacgggcaaggaagtggtc
gcccgcacggtgcacaacctgtccctgcgccgcgacaagcccttcatcgccatcaactgc
gcgtccatccccgcgacgctgatcgagtccgagctcttcggtcacgagcgcggcgccttc
accggcgcggatcagcgccgcccgggcgtgttcgagatggcccacggcggcacgctcttc
ctggacgagttgggtgaaatccccatcgacctgcaggccaagctcctgcgcgtgctggaa
gagggccgcctgcgccggctgggtggcaaggtggagatcgaagtggacgtgcgcgtgctg
tccgccacgaaccgcgacctgaagcaggagatcaagaaccagcgcttccgcgaggacctc
tacttccgcctcaacgtgttccagctgcacctgccgcccctgcgcgagcgccgggacgac
gtgcccatcctggtccagcacttcgtggacaagttccgcggggactccgccaagcgcgtc
tccggcgtgcacccggacgcgatggaggtcctcaagaactacgactggccgggcaacatc
cgcgagctgcgcaacgccgtggagcgcgccgtcatcctctgcgacggggagctgatcacc
cgcgagcacctgccgcccgacatggccggcaagtccccggagcgccacacgttcaagctg
ccgttcggcctgagcctggacgccgtggagcgcgagtacatcctgggcagcctccagcgg
aacgggaacaacaaggcccgcacggcggaggtgctgggggtgagcgagaagacgctctac
aacaagctcaaccgctacgcggcggagaaccgggcccagggcgccccgggtggcggcagc
cccctggggggacagggcaacgacggccccatgagcgccagcagcttcctgacccgctga
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