Corallococcus coralloides: COCOR_04133
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Entry
COCOR_04133 CDS
T01780
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
Organism
ccx
Corallococcus coralloides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AFE10162
UniProt:
H8MXC6
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Position
5146881..5149541
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AA seq
886 aa
AA seq
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MAAERLQKYLARAGVASRRHAEELITSGRVGVNNETVTELGSRVEPGVDLVTVDGKLVTP
PEESSYYLLYKPVGVVTTLSDPQGRPTVASYVEETGRRLFPVGRLDYDAEGALLFTDDGA
LAHKLTHPSFQVPRTYLAKVKGAPDMPTLEKLRGGVRLEDGMATPVSVDVFEKAERNTWL
KIVVAEGRPHLIKRLCAAVGHPVVRLFRPNYAGVGVEGLRPGELRPLKTAEVMQLTEVAE
GRAQPNASDLKLPPRRHGRSAPGFGGADDDDIELSMDDDAPVAPRKTERAAKKAPATGPK
TREARPERKEWKGVQDGGTRPPKFAKRGATLAADDDADLDDVPTFDDEGDETESDAAEGA
TYGKAARGAGRGGKSEGERAPRGAARFGKPAGAGRSEGGASRGGGRFGAEGGASRGGGRF
GAEGGASRGGGRFGKPAGAGRGGDEAPRGRFGKPARAGAEGDAPRGGGRFGKPAGGSRFG
GEEGGARGGGRFGKPAGRFGDEGGARGGGRFGKPAGRFGGEEGGAPRGGGRFGKPAGAGR
SEGGASRFGGEEGGARGAGRFGKPARAGRGGDEAPRSGFGRPARADAEGGASRGGDRFGK
PSSRFGGEEGSAPRGGSRFGKPAGRGGDEGAPRGGGRFGAEGGASRGGGRFGKPSGRFGD
EGGAPRGGGRFGKPAGRFGDEGGARGGGRFGKPAGRFGAEGGAPRGGGRFGKPAGGSRFG
KPAGAGRGGDEGGAPRGRFGKPAGGSRFGGEEGGARGGGRFGKPAGAGRSEGGARGGARF
GKPAGAGGDRPERREWKPRGESAGRPERKPRGEDSGSRSRGGGESSSSASGERIVRAGVK
KAPPGERGGGYQEFKERKTRASEPRWNSKAPRGGAGRPPPRGGRSR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaacgtttgcagaagtacctggctcgcgcgggagttgcttcgcgccggcac
gcggaagaactcatcacctccggtcgcgtcggagtgaacaacgagacggtgacggagctg
ggcagccgggtggagcccggagtggacctggtgaccgtcgatgggaagctcgtcacgccg
cccgaagagtcgtcctactacctgctgtacaagcccgtgggcgtcgtgacgacgctgtcg
gatccgcagggccggcccacggtggccagctatgtggaggagacgggccgccgcttgttc
cccgtgggacgtctggactacgacgccgaaggagcgctgctcttcacggatgacggcgcg
ctggcgcacaagctcacgcatccgagcttccaggtgccgcgcacgtacctggcgaaggtg
aagggcgcgccggacatgcccacgctggagaagctgcgcgggggcgtgcggctggaagac
ggcatggccacgccggtgtccgtggacgtcttcgagaaggccgaacgcaacacctggctg
aagatcgtcgtggcggaaggccgtccgcacctcatcaagcgcctgtgcgcggcggtgggg
cacccggtggtgcgcctgttccgtccgaactacgcgggcgtgggcgtggaggggctgcgc
cctggcgagctgcggccgctgaagaccgcggaagtgatgcagctgacggaggtggcggaa
ggccgtgcgcagccgaatgcctcggacctgaagctgccgccgcgccgtcacggccgttcg
gcgccgggcttcggcggggcggatgacgacgacatcgagctgtcgatggacgacgacgcg
ccggtggcgccgcgcaagacggagcgcgcggcgaagaaggctcctgcgacggggcccaag
acccgcgaggcgcgtccggagcgcaaggagtggaagggcgtgcaggacggtggcacgcgt
ccgccgaagttcgcgaagcgcggggcgacgctggccgcggacgacgacgcggatctggat
gacgtgccgacgttcgacgacgaaggtgacgagacggagtcggacgccgccgagggagcc
acctacggcaaggccgcgcgaggcgcgggccgtggcggtaagtccgagggtgagcgtgct
ccccgtggcgccgcgcggttcggcaagccggccggtgcgggccgctccgagggtggtgcg
tcgcgcggtggtggccggtttggcgccgagggcggtgcctcccgtggcggtggccggttc
ggcgccgagggcggtgcgtcgcgcggtggtggccggttcggtaagccggccggcgcgggt
cgtggtggtgacgaagcgccgcgcggtcgcttcggcaagccggcccgtgctggcgcagag
ggcgatgctccccgtggcggtggccgcttcggcaagccggcgggcggcagccgcttcggt
ggcgaagagggtggcgctcgtggcggtggccgtttcggcaagcccgcgggtcgcttcggt
gacgagggtggcgctcgtggcggtggccgcttcggcaagcccgcgggtcgcttcggcggt
gaagagggcggcgctcctcgtggcggtggccgcttcggcaagcccgccggtgcgggtcgt
tccgagggtggcgcgagccgtttcggtggcgaagagggtggcgctcgtggcgcgggccgt
ttcggcaagccggcccgggcaggccgcggtggtgatgaggctccgcgcagcggcttcggc
aggccggcccgtgcggacgccgagggtggcgcgtcgcgaggcggcgaccgcttcggcaag
ccttcgagccgcttcggaggtgaagagggaagtgcgccgcgcggtggcagccggttcgga
aagccggcgggccgtggcggtgacgaaggcgccccgcgcggtggcggtcgcttcggcgcc
gagggtggcgcgtcgcgcggcggtggccgtttcggcaagccttcgggccgcttcggtgac
gagggtggcgcgcctcgcggtggtggtcgcttcggcaagcccgcgggtcgcttcggtgac
gagggtggcgctcgtggcggtggccgtttcggcaagcccgcgggtcgcttcggcgccgag
ggcggtgctcctcgcggcggtggtcgcttcggcaagccggcgggtggcagccgcttcggc
aagccggccggtgcgggccgtggcggtgacgaaggcggcgctcctcgcggccgcttcggc
aagccggcgggtggcagccgcttcggcggcgaagagggtggcgcccgtggcggtggccgc
ttcggcaagcccgccggcgcgggtcgttccgagggcggcgcgcgcggtggtgcccgcttc
ggcaagcctgctggcgcgggcggtgaccgtccggagcgccgtgagtggaagccgcgcggc
gagtccgccggccgtcccgagcggaagccccgtggcgaggactccggcagccggtctcgc
ggcggcggtgagtcctcgtccagcgcctccggcgagcgcatcgtccgcgcgggcgtgaag
aaggcccctccgggcgagcgcggcggcggctaccaggaattcaaggagcgcaagacccgc
gcctcggagccgcgctggaacagcaaggcgcctcggggaggggcaggccgtccgccccct
cgtggtggccgctcccgctga
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