Corallococcus coralloides: COCOR_04196
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Entry
COCOR_04196 CDS
T01780
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccx03009
]
COCOR_04196 (rumA)
Enzymes [BR:
ccx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
COCOR_04196 (rumA)
Ribosome biogenesis [BR:
ccx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
COCOR_04196 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_11
PabTrmU54_TRAM_dom
TRM5-TYW2_MTfase
Ubie_methyltran
Cons_hypoth95
Methyltransf_4
Methyltransf_15
Methyltransf_ANTKMT
RrnaAD
PCMT
Motif
Other DBs
NCBI-ProteinID:
AFE10287
UniProt:
H8MYX0
LinkDB
All DBs
Position
5221778..5223073
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AA seq
431 aa
AA seq
DB search
MTTLPESPIELTIERLGQLGEGVAQWEGRTVFVPGAFPGDTVRVRLEAQGKVLRGLLGQV
LTDGAERVPSRCVYSDACGGCDWLELSVPAQRSAKQEIVLSTLEHLGHLKRSDFTVRPLM
VAPRDWGYRRRAVLHGAGKGALGYFGRRTHERIPVDVCPALTPVLTALPGKLAPLLKPLA
KDTEEVLLLAEGDKAAFAVNMSGPVTARHLEAAEAAVRALRLEGAVLVPKEGSARLIGRP
VLRSLSPLRPEVPVYLRPDAFAQAHAEANVGLVTAALYELGAKETDSVLELYSGNGNFTF
PLAGTAGSVLGVESSPVGVELAQRSAREGGVANVRFVQGDARKVCDGLVAEGRSFDLCLA
DPPRAGAPGLAKWMRALNVRRVVYVACDPASLARDAAGLVEAGYKPVALQVVDMFPQTHH
VEAVMSFERGA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgctgcccgaatcccccattgaactgacgattgaacggctgggccagctgggc
gaaggcgtggcccaatgggagggccgcaccgtcttcgtgccgggcgccttccccggcgac
accgtgcgcgtgcgcctggaggcccagggcaaggtcctgcgcggcctgttgggccaggtg
ctgacggatggggcggagcgcgtgccgtcgcgctgcgtgtactccgacgcgtgcggcggc
tgtgactggctggagctgtccgtcccggcccagcggtccgcgaagcaggagatcgtcctc
tccacgctggagcacctgggccacctgaagcgctcggacttcaccgtgcggccgttgatg
gtggcgccccgggactggggctaccgccgccgcgcggtgctgcacggggcggggaagggg
gcgctcggctacttcggccggcgcacgcacgagcgcatccccgtggacgtctgccccgcg
ctgacgccggtgctcactgcgctgcccgggaagctggccccgctgctcaagccgctggcc
aaggacaccgaggaggtgctgctgctggccgagggtgacaaggccgcgttcgcggtgaac
atgagcggcccggtgacggcgcggcacctggaggctgcggaggccgcggtgcgcgcgctg
cggctggagggcgcggtgctggtgcccaaggagggctctgcgcggctcatcggccggccg
gtgctgcgctcgctgtccccgctgcgcccggaagtgccggtgtacctgcggccggatgcg
ttcgcgcaggcgcacgcggaggccaacgtggggctcgtcacggcggccctgtacgaactg
ggcgcgaaggagacggactccgtgctggagctgtactccggcaatggcaacttcacgttc
cccctggcgggcacggccgggtcggtgctgggcgtggagtcgtccccggtgggcgtggag
ttggcgcagcggagtgctcgcgagggtggggtggccaacgtgcgcttcgtccagggcgac
gctcgcaaggtgtgcgacgggctggtggcggaggggcgttcgttcgacctgtgcctcgcg
gatccgccgcgcgccggggcgccgggcctggcgaagtggatgcgcgcgctgaacgtgcgc
cgggtcgtctacgtggcgtgcgacccggcctcgctggcgcgcgacgcggcggggctggtg
gaggccggttacaagcccgtggcgctccaggtggtggacatgttcccgcagacgcaccac
gtggaagcggtgatgtccttcgaacggggagcctga
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