Corallococcus coralloides: COCOR_04199
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Entry
COCOR_04199 CDS
T01780
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_04199 (miaB)
Enzymes [BR:
ccx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
COCOR_04199 (miaB)
Transfer RNA biogenesis [BR:
ccx03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
COCOR_04199 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AFE09423
UniProt:
H8MYX3
LinkDB
All DBs
Position
5225096..5226481
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AA seq
461 aa
AA seq
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MKRYFIHTFGCQMNVNDSLRMSEALSKMSYVPTPEPDNADLIILNTCSIREKAEDKMLSA
LGRYRAVKASRGAILGVGGCVAQQEKDKLLKKVPYLDFVFGPDNIAKLPEVIARVQDARE
RVVETAFVDSEEYVFPRADAETSRGKVTEFVTVMKGCDNVCSFCIVPHTRGREVSRNFPD
VLTEVADLAGVGLREVTLIGQNVNSYQGGISFAQLLLRTAEVPGIERVRFTTSHPHDLSD
ELIEAFRVQPKIAPHFHLPVQCGSDRILKMMRRDYTVEQYMERLEKLRAARPGIAITTDI
IVGFPGETEEEFEMTMQLTERVKYDNQFSFVYSPRPKTGAALREKDWGPIPHEVKVARLE
RLQKLQRRISGEYTQAQVGLDVEVLVEGRSRYDATKRFGRTPENRTVNFEGDAPAGSIVK
VHVERATPNQLAGKQVAVLQAPTVAPPAVELPVPLHVPAEA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctacttcatccacaccttcggctgccagatgaacgtcaacgactcgctccgc
atgagcgaggcgttgtcgaagatgtcctacgtccccacgccggagccggacaacgcggac
ctcatcatcctcaacacctgctccatccgggagaaggccgaggacaagatgctgtccgcg
ctggggcgctaccgcgccgtgaaggccagccggggcgccatcctgggcgtgggcggctgc
gtggcccagcaggagaaggacaagctgctcaagaaggtcccgtacctggacttcgtcttc
ggcccggacaacatcgcgaagctgccggaagtcatcgcccgcgtgcaggacgcccgcgag
cgcgtggtggagacggccttcgtggactccgaggagtacgtcttcccgcgcgcggacgcg
gagacgtcccgaggcaaggtgaccgagttcgtcaccgtgatgaagggctgcgacaacgtc
tgctcgttctgcatcgtcccgcacacccgtggccgcgaggtgagccgcaacttcccggac
gtgctcaccgaggtcgcggacctggcgggcgtgggcctgcgtgaggtcacgctcatcggc
cagaacgtcaactcgtaccagggcggcatcagcttcgcgcagctgctcctgcgcaccgcg
gaggtgccgggcatcgagcgcgtgcgcttcaccacgagccacccgcatgacctgtcggac
gagctgatcgaagccttccgcgtgcagcccaagattgccccgcacttccacctgcccgtg
cagtgcggcagcgaccgcatcctgaagatgatgcgccgcgactacaccgtcgagcagtac
atggagcggctggagaagctgcgcgccgcgcggcccggcatcgccatcaccacggacatc
atcgtgggcttccccggagagaccgaggaagagttcgagatgacgatgcagctcaccgaa
cgggtgaagtacgacaaccagttctccttcgtgtacagcccgcgccccaagacgggcgcc
gcgctgcgcgagaaggactggggccccatcccgcacgaggtgaaggtggcccggctggag
cggctgcagaagctgcagcggcgcatcagcggcgagtacacccaggcgcaggtgggcctg
gacgtggaggtgctggtggaagggcgctcgcgctacgacgccaccaagcgcttcggccgc
acgccggagaaccgcacggtgaacttcgagggcgatgcccccgcgggctccatcgtgaag
gtgcacgtggagcgcgccacgcccaaccagctcgcgggcaagcaggtggcggtgctccag
gcccccaccgtggcgccgccggcggtggagctgcccgtgccgttgcatgtcccggcggag
gcctga
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