Corallococcus coralloides: COCOR_04243
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Entry
COCOR_04243 CDS
T01780
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccx03019
]
COCOR_04243 (rnc)
03009 Ribosome biogenesis [BR:
ccx03009
]
COCOR_04243 (rnc)
03036 Chromosome and associated proteins [BR:
ccx03036
]
COCOR_04243 (rnc)
Enzymes [BR:
ccx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
COCOR_04243 (rnc)
Messenger RNA biogenesis [BR:
ccx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
COCOR_04243 (rnc)
Ribosome biogenesis [BR:
ccx03009
]
Eukaryotic type
90S particles
RNase
COCOR_04243 (rnc)
Prokaryotic type
rRNA processing factors
COCOR_04243 (rnc)
Chromosome and associated proteins [BR:
ccx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
COCOR_04243 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AFE10174
UniProt:
H8MZ17
LinkDB
All DBs
Position
complement(5352631..5353413)
Genome browser
AA seq
260 aa
AA seq
DB search
MEKMTLVERVQALEARLGVQFSKRDLALEALTHKTYVNENRDQNLKDNQRLEFLGDAVVD
LAVSHRLMDRCPGVPEGELTKMRARIVHEEGLARVARSLRLGELLLLGRGEAQSGGRDKN
SLLADAMEAVLGAVYLSGGLEPALALVDRIFGELVEEVASGAGRLDYKTLLQELAHEKLK
LSPRYRVVAETGPEHAKVFEVEVCIGESVYARATGRNKKEAEQAAARTTLERLKAEVAVV
ASPDVVAPVPGGPSPDDPPA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagatgaccctggtggagcgggtgcaggccctggaggcgcgcctgggcgtgcag
ttctccaagcgcgacctggccctggaggcgctgacgcacaagacgtacgtcaacgagaac
cgcgaccagaacctcaaggacaaccagcgcctggagttcctgggcgacgccgtggtggac
ctggccgtgagccaccggctgatggaccgctgccccggcgtccccgagggcgagctcacc
aagatgcgcgcccgcatcgtccatgaagagggcctggcccgcgtggcccgcagcctgcgc
ctgggcgagctgctcctgttgggccggggcgaggcccagtccggaggccgcgacaagaac
tcgctgctcgcggacgcgatggaggcggtgctcggcgccgtctacctgagcggcggcctg
gagccggcgctggccctggtggaccgcatcttcggggagctggtggaggaggtggcctcc
ggcgcgggccgcctggactacaagacgctcctccaggagctcgcccacgagaagctcaag
ctgtcgccgcgctaccgcgtggtggcggaaaccggcccggaacacgccaaggtgttcgag
gtggaggtgtgtatcggggagtccgtgtacgcccgcgccaccggccggaacaagaaggag
gccgagcaggcagccgctcgcaccacgctggagcgcctgaaggcggaggtggctgtcgtg
gcatccccggatgtcgtggcgcccgtcccgggaggtccttcaccggacgaccctccggcg
tga
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