Corallococcus coralloides: COCOR_04252
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Entry
COCOR_04252 CDS
T01780
Symbol
ybdL
Name
(GenBank) class I/II aminotransferase
KO
K14267
N-succinyldiaminopimelate aminotransferase [EC:
2.6.1.17
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00300
Lysine biosynthesis
ccx01100
Metabolic pathways
ccx01120
Microbial metabolism in diverse environments
ccx01230
Biosynthesis of amino acids
Module
ccx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
COCOR_04252 (ybdL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccx01007
]
COCOR_04252 (ybdL)
Enzymes [BR:
ccx01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.17 succinyldiaminopimelate transaminase
COCOR_04252 (ybdL)
Amino acid related enzymes [BR:
ccx01007
]
Aminotransferase (transaminase)
Class I
COCOR_04252 (ybdL)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFE10732
UniProt:
H8N0F8
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Position
complement(5362300..5363499)
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AA seq
399 aa
AA seq
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MSPRPVLAQRVSRFGTTVFSEFSALALKHQAVNLGQGFPDFDGPDAIKEAAWKAIQGGVN
QYAPGTGAKDLRNAIAEHSQRFYNHAVDPDTMVTVTSGATEAILDVILGLVDPGDEVVAF
EPFYDSYDANIAFVGATPRYVPLRPPDAEHATWWFDRDEVRAAFGPKTRLLILNSPHNPT
GKVFTREELEFLGHLCAEHDVKVLADEVYEHIVFAPAKHLRAATVPVLADRTVTVSSAGK
SFSLTGWKVGWIIAPPPLRDAVQRAHQFVTFATASPFQAAMAVALRLPDSYFQELTALYT
ARRERLLTGLRAAGLQAYSPEGSYFILADIRGYGFEDDVAFCRHLVTEVGVAGIPPSVFY
GPEHRHLGQRFARFAFCKTDGVLDEAVRRLREKLPALKR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtccccccggcccgtgctcgcgcagcgcgtctcccgcttcggcaccaccgtcttctcc
gagttcagcgcgctggccctgaagcaccaggccgtgaacctggggcaggggttcccggac
ttcgacgggccggacgccatcaaggaagcggcgtggaaggccatccagggcggcgtcaac
cagtacgcccccggcacgggcgccaaggacctgcgcaacgccatcgccgagcactcgcag
cgcttctacaaccacgccgtggacccggacaccatggtcaccgtcaccagcggcgcgacg
gaggccatcctcgacgtcatcctgggcctggtggatccgggcgacgaggtggtggccttc
gagccgttctacgactcgtacgacgccaacatcgccttcgtgggcgccacgccgcgctac
gtgccgctgcgcccgccggacgcggagcacgccacctggtggttcgaccgcgatgaggtc
cgcgccgccttcggtccgaagacgcggctgctcatcctcaactcgccgcacaaccccacg
ggcaaggtcttcacgcgcgaggagctggagttcctgggccacctctgcgccgagcacgac
gtgaaggtgctggcggatgaagtctacgagcacatcgtcttcgcccccgcgaagcacctc
cgcgcggccacggtgccggtgctcgcggaccgcacggtgacggtgagcagcgcgggcaag
tccttcagcctgacggggtggaaggttggctggatcatcgcgccgccgccgctcagggac
gcggtgcagcgcgcgcaccagttcgtcaccttcgccaccgcgtcgccgttccaggccgcc
atggccgtggcgctgcggctgccggacagctacttccaggagctgacggcgctctacacc
gccaggcgcgaacggctgctcacgggcctgcgcgcggcggggctccaggcgtactcgccg
gagggcagctacttcatcctcgcggacatccgcggctacggcttcgaggacgacgtcgcg
ttctgccggcacctggtgacggaggtgggggtcgcgggcatcccgcccagcgtcttctac
ggcccggagcaccggcacctgggacagcgcttcgcgcgcttcgccttctgcaagacggac
ggcgtgctggacgaagccgtgcgccgcctgcgcgagaagctgcccgccctcaagcgctga
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