Corallococcus coralloides: COCOR_04436
Help
Entry
COCOR_04436 CDS
T01780
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccx03032
]
COCOR_04436 (ihfA)
03036 Chromosome and associated proteins [BR:
ccx03036
]
COCOR_04436 (ihfA)
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_04436 (ihfA)
DNA replication proteins [BR:
ccx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
COCOR_04436 (ihfA)
Chromosome and associated proteins [BR:
ccx03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
COCOR_04436 (ihfA)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
COCOR_04436 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AFE09119
UniProt:
H8MFB6
LinkDB
All DBs
Position
complement(5622117..5622503)
Genome browser
AA seq
128 aa
AA seq
DB search
MTKADIIEGVYEKVGFSKKESAEIVELVFDTVKETLERGDKIKISGFGNFQVRQKKARVG
RNPQTGKEIEISARRVLTFRPSQVLKSALNGEAPPENHAEIDAQEEAAADAAEARGEDFD
EGMEEGDE
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagcggacatcatcgagggcgtctacgagaaggtcggcttctccaagaaggag
tcggcggagatcgtcgagctcgtcttcgacaccgtgaaggagacgttggagcgcggggac
aagatcaagatctccgggttcggaaacttccaggtgcgccagaagaaggcgcgcgtgggg
cgcaacccgcagacgggcaaggagatcgagatcagcgcccgccgggtcctgaccttccgg
ccgagccaggtgttgaagagtgccctgaacggcgaggcacccccggagaaccacgcggag
atcgacgcgcaggaagaggcggcggcggacgcggcggaagcccggggcgaggacttcgac
gagggaatggaagagggcgacgagtag
DBGET
integrated database retrieval system
