Corallococcus coralloides: COCOR_04815
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Entry
COCOR_04815 CDS
T01780
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00521
Streptomycin biosynthesis
ccx00523
Polyketide sugar unit biosynthesis
ccx00525
Acarbose and validamycin biosynthesis
ccx00541
Biosynthesis of various nucleotide sugars
ccx01100
Metabolic pathways
ccx01110
Biosynthesis of secondary metabolites
ccx01250
Biosynthesis of nucleotide sugars
Module
ccx_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
COCOR_04815 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
COCOR_04815 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
COCOR_04815 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
COCOR_04815 (rfbB)
00525 Acarbose and validamycin biosynthesis
COCOR_04815 (rfbB)
Enzymes [BR:
ccx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
COCOR_04815 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
KR
adh_short
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AFE10122
UniProt:
H8MM36
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All DBs
Position
complement(6087867..6088892)
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AA seq
341 aa
AA seq
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MNVLVTGGCGFIGSNLVKYLRRERPDWKIVNLDKLTYAGNLETLADLEGDPRHVFVRGDI
ANRELVEHLIVQHGIDAVMHLAAESHVDRSILGPEVFIHTNVLGTQQLLEACRARGVKRF
LMVSTDEVYGSLGPTGAFTETSPLQPSSPYSASKTSSDLVALAYHHTFKMDVVVTRCSNN
YGRYQFPEKLIPLMVVNALHDKPLPVYGDGANVRDWLHVDDHCQGLLVALEKGRAGEVYN
IGGGSERRNIEIVKGILGLLKKPESLIQYVADRPGHDRRYAIDPTKIRTELGYQPKHTFE
QGLAETVTWYVENRAWWERVTSGAYRQYFDTQYKARLQGRG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcctggtgacagggggctgcggcttcatcggctccaacctggtgaagtacctc
cgccgcgagcggcccgactggaagatcgtcaacctcgacaagctcacgtacgcgggcaac
ctcgagaccctcgccgacctggaaggtgacccgcggcacgtcttcgtgcgcggtgacatc
gccaaccgggagctggtcgagcacctcatcgtccagcacggcatcgatgcggtgatgcac
ctggcggctgaaagccacgtggaccgctccatcctgggcccggaggtgttcatccacacc
aacgtgctgggcacccagcagctcctggaggcctgccgcgcccggggcgtgaagcgcttc
ctgatggtctccaccgacgaggtctacggctcgctggggcccacgggcgccttcacggag
acctctccgctgcagccctccagcccgtactccgcctccaagacgtcctcggacctggtc
gcgctggcctaccaccacaccttcaagatggacgtggtggtgacgcgctgctcgaacaac
tacggccgctaccagttcccggagaagctcatcccgctgatggtggtgaacgcgctgcac
gacaaaccgctgcccgtctacggcgacggcgccaacgtgcgcgactggctccacgtggac
gaccactgccagggcctgctggtggcgctggagaagggccgcgcgggcgaggtctacaac
atcggcggcggctccgagcggcgcaacatcgagatcgtcaagggcatcctgggcctcctg
aagaagcccgagtccctcatccagtacgtggcggaccggcccggccatgaccgccgctac
gccatcgaccccacgaagatccgcacggagctgggttatcagccgaagcacaccttcgag
caggggctggcggagacggtgacctggtacgtggagaaccgcgcctggtgggagcgcgtc
accagcggcgcctaccggcagtacttcgacacccagtacaaggcccgtctgcaggggcgg
ggttag
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