Corallococcus coralloides: COCOR_04827
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Entry
COCOR_04827 CDS
T01780
Symbol
rfbA1
Name
(GenBank) o-antigen ABC exporter, permease
KO
K09690
homopolymeric O-antigen transport system permease protein
Organism
ccx
Corallococcus coralloides
Pathway
ccx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
COCOR_04827 (rfbA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccx02000
]
COCOR_04827 (rfbA1)
Transporters [BR:
ccx02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Homopolymeric O-antigen
COCOR_04827 (rfbA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
SPA
Motif
Other DBs
NCBI-ProteinID:
AFE10121
UniProt:
H8MM48
LinkDB
All DBs
Position
complement(6103638..6104417)
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AA seq
259 aa
AA seq
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MLRNLRELYQYRGLLLSLTQRELKARYRNSVLGFFWTFLNPMLQMGVYSLLFTVYMRQNI
PGYTFFVFVGLLPWIWFATSLGTGASAISDRRDLLTKVRFPAQVLPATVVVTNLCNYVLS
LPLMVALGLLLGYVPTWHVVAFPVVLLTQLCMTVALVYIVSALNVTFRDLQQIIANLLTM
WFFVTPVFYRVDSLPEAVRAPIVLLNPMAVMVTSYQAIFYEHQLPQPGPLLMWLGISLAL
LWIAAGIFERRREDFAEFI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcaacctccgtgagctctaccagtaccggggcctcctgctcagcctgacccag
cgcgagctgaaggcgcggtaccggaactcggtgctcggcttcttctggacgttcctcaac
ccgatgctccagatgggcgtctactcgctgctgttcaccgtctacatgcggcagaacatc
cccgggtacacgttcttcgtcttcgtggggttgctcccgtggatctggttcgccacgtca
ctggggaccggcgccagcgccatcagtgaccggcgcgacctgctcaccaaggtgcgcttc
cccgcccaggtgctgccggccacggtggtggtgaccaacctgtgcaactacgtgctgtcc
ctgccgctgatggtcgcgctggggctgctcctgggctacgtgcccacctggcacgtggtg
gccttcccggtggtgctgctcacccagctgtgcatgacggtggcgctggtctacatcgtg
tccgcgctcaacgtgacgttccgggacctgcagcagatcatcgccaacctgctgacgatg
tggttcttcgtcacgccggtcttctaccgggtggactcgctgccggaggcggtccgggcg
ccgatcgtgctgctcaaccccatggcggtcatggtgacgtcctaccaggccatcttctac
gaacatcagctgccacagcccggcccgctcttgatgtggttgggcatctccctggcgctg
ttgtggatcgctgcgggcatcttcgagcgccgccgcgaggacttcgcggagttcatatga
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