Corallococcus coralloides: COCOR_05001
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Entry
COCOR_05001 CDS
T01780
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00260
Glycine, serine and threonine metabolism
ccx00630
Glyoxylate and dicarboxylate metabolism
ccx00670
One carbon pool by folate
ccx00785
Lipoic acid metabolism
ccx01100
Metabolic pathways
ccx01110
Biosynthesis of secondary metabolites
ccx01200
Carbon metabolism
Module
ccx_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
COCOR_05001 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COCOR_05001 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
COCOR_05001 (gcvP)
00670 One carbon pool by folate
COCOR_05001 (gcvP)
Enzymes [BR:
ccx01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
COCOR_05001 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AFE08892
UniProt:
H8MPW8
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All DBs
Position
complement(6289287..6292190)
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AA seq
967 aa
AA seq
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MSLNWKYQESFAGRHIGPETPEVKQMLSSLGVTSLDAFIESAVPPAIRSQEPLRLPAGRG
ENEVLAQLEAIAAKNQVFRSFIGMGYSDTHVPNVILRNIFQNPGWYTQYTPYQAEIAQGR
LEALLNFQTMVTDLTGMEVANASMLDEGTAAAEAMALALHAKGEGDGGAFFVSDGCHPQT
VDVVRTRAIPLGVEVVVGDHRTVDLSQKKFFGALVQYPATDGVVHDYRAFGEKVHAAGGL
LVVAADLLSLTLLTAPGEFGADAVVGSAQRFGVPLGYGGPHAAYFATKHAYTRVMPGRLI
GVSEDSGGRPALRMALQTREQHIRREKATSNICTAQVLLAVMAGMYAVYHGPEGLKAIAE
RVHGLTVVLSRGLAKLGFKPKHEQFFDTLRVELLPAQVRAVLSSAEAAKMNFRRIDEKTL
GLSLDETTRAKDVEDILAAFIQGANKSASPVNLDEVAEGLESPLAPELRRTSAYLTHPVF
NRYHSETEMLRYVRRLEAKDLSLTHSMIPLGSCTMKLNATAEMIPVTWPQFSKLHPFAPT
SQAAGYKVIFEQLEHALSQVTGFAGCSLQPNAGSQGEYAGLLVIRAYHQARGQGHRDVCL
IPSSAHGTNPASAVMAGYRVVVTRCDENGNIDLNDLRAKADEHKDKLAALMVTYPSTHGV
FEEEIREICSAIHERGGQVYMDGANLNAQVGLTAPGLVGADVCHINLHKTFCIPHGGGGP
GMGPICVASHLVKFLPGHPVIQTGGADAIGAISAAPWGSASILLISWMYIQMMGGEGLTQ
ATKMAILNANYVAERLQPHYPVLYRGKRGRVAHECIVDLRPLKKTAGVEVEDVAKRLMDY
GFHAPTVSFPVAGTLMIEPTESESKAELDRFCDAMIAIRQEIRDVEEGRAPKDNNVLKNA
PHTARTLTAPEWNRPYTREQAVFPTPWVRDNKFWPSVGRLNNVLGDRKLVCSCPPIEDYD
TPAQKVA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcaactggaagtaccaggagtccttcgctggccgtcacatcggtccggagacc
cctgaagtgaagcagatgctgtcctctctgggcgtcacctcgctcgatgccttcatcgag
agcgccgtgcctcccgccatccgctcccaggagcccctgcgcctgcccgccggccgcggc
gagaacgaggtgctggcgcagctggaggccatcgccgcgaagaaccaggtgttccggtcc
ttcatcggcatgggctacagcgacacccacgtccccaacgtcatcctgcgcaacatcttc
cagaacccgggctggtacacccagtacacgccctaccaggcggagatcgcccagggccgg
ttggaggcgctgctcaacttccagacgatggtgacggacctcaccggcatggaggtggcc
aacgcctccatgctggatgaaggcaccgccgcggcggaggccatggcgctcgcgctgcac
gccaagggagaaggggacgggggcgcgttcttcgtctccgacggctgccacccgcagacg
gtggacgtggtgcgcacgcgcgcgatccccctgggcgtggaggtcgtcgtgggcgaccac
cgcacggtggacctgtcccagaagaagttcttcggcgcgctggtgcagtacccggcgacg
gacggcgtggtgcacgactaccgcgccttcggtgagaaggtgcacgcggcgggcggcctg
ctcgtcgtcgcggcggacctgctgtccttgacgctgctcacggcgcccggcgagttcggc
gcggacgcggtggtgggcagcgcgcagcgcttcggcgtgccgctgggctatggcggcccg
cacgccgcctacttcgccacgaagcacgcctacacccgcgtgatgccgggccgcctcatc
ggcgtgtccgaggactcgggtggccggcccgcgctgcgcatggcgctgcagacgcgcgag
cagcacatccgccgtgagaaggccacgagcaacatctgcaccgcgcaggtgctgctggcc
gtgatggccggcatgtacgccgtctaccacgggccggaggggctcaaggccatcgcggag
cgcgtgcacgggctcacggtggtgctgtcgcggggcctggcgaagctgggcttcaagccg
aagcacgagcagttcttcgacacgctgcgcgtggagctgctgcccgcgcaggtgcgggcc
gtgctgtcctccgcggaagccgcgaagatgaacttccgtcgcatcgacgagaagacgctc
ggcctgtcgctggacgagacgacgcgcgccaaggacgtggaggacatcctcgcggccttc
atccagggcgcgaacaagtccgcgtccccggtgaacctggacgaggtcgccgaaggcctg
gagagcccgctcgcccccgagctgcgccgcacgagcgcgtacctcacgcacccggtcttc
aaccgctaccactccgagacggagatgctgcggtacgtgcgccggctggaggcgaaggac
ctgtccctcacgcactccatgattccgctgggcagctgcaccatgaagctcaacgccacc
gcggagatgatcccggtgacgtggccccagttcagcaagctgcacccgttcgcgcccacc
tcgcaggcggccggctacaaggtcatcttcgagcagctggagcacgcgctgtcgcaggtg
acgggcttcgccgggtgctcgctgcagcccaacgcgggcagccagggtgagtacgcgggt
ctgctcgtgattcgcgcctaccaccaggcgcgcgggcaggggcaccgcgacgtgtgcctc
atcccgtcctccgcgcacggcaccaacccggcttccgcggtgatggccggctaccgcgtc
gtcgtcaccaggtgcgacgagaacggcaacatcgacctgaacgacctgcgcgccaaggcg
gacgagcacaaggacaagctcgccgcgctgatggtgacgtacccctccacgcacggcgtg
ttcgaggaggagatccgcgagatctgctccgccatccacgagcgcggcggccaggtgtac
atggacggcgccaacctcaacgcgcaggtgggcctcaccgcgccgggcctggtgggcgcg
gacgtctgccacatcaacctgcacaagacgttctgcatcccgcacggcggtggcggcccg
ggcatgggccccatctgcgtggcgtcccacctggtgaagttcctccccggacaccccgtc
atccagacgggcggggcggacgccatcggcgccatctccgcggcgccgtggggcagcgcg
agcatcctgctcatctcctggatgtacatccagatgatgggcggcgagggcctgacgcag
gccacgaagatggccatcctcaacgccaactacgtcgcggagcggctccagccgcactac
ccggtgctctaccggggcaagcgcggccgggtggcccacgagtgcatcgtggacctgcgt
ccgctcaagaagaccgcgggcgtggaggtggaggacgtggccaagcgcctcatggactac
ggcttccacgcgcccaccgtgtcgttcccggtggcgggcacgctgatgatcgagcccacg
gagtccgagtccaaggcggagctggaccgcttctgcgacgcgatgatcgccatccgccag
gagatccgcgacgtggaggagggccgcgcgcccaaggacaacaacgtcctgaagaacgcg
ccgcacaccgcgcgcacgctcaccgcgccggagtggaaccgcccgtacacccgcgagcag
gccgtgttccccacgccgtgggtgcgcgacaacaagttctggccgtccgtgggacgcctg
aacaacgtgctgggtgaccgcaagctcgtgtgctcgtgccctcccatcgaggactacgac
acgcccgcgcagaaggtcgcgtaa
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