Corallococcus coralloides: COCOR_05412
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Entry
COCOR_05412 CDS
T01780
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ccx
Corallococcus coralloides
Pathway
ccx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
COCOR_05412 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_05412 (uvrB)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
COCOR_05412 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
COCOR_05412 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_22
UB2H
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AFE10625
UniProt:
H8MXJ4
LinkDB
All DBs
Position
complement(6804948..6807134)
Genome browser
AA seq
728 aa
AA seq
DB search
MLDLSSMPDFELVSEHKPQGDQPRAIGELTEGLLRGDRYQTLLGVTGSGKTFTMANLIAN
VKRPSLVIAHNKTLAAQLYGEFKALFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDSSI
NDNIERMRHSATHSLRTRNDVIIVASVSCIYGLGAARSYVDLAIRAAVGEEMGRDGFMRK
LVEAQYERNDLDFHRGTFRARGDTVEVFPAYEEERAVRVSFFGDEVERITEFDPLRGQTL
GQLEKIVIFPASHYVAGADARQNAMRTIREELAEQLQKFKAEGKLLEAQRLEQRTMFDLE
MIEQVGYCNGIENYSRHFTGRAPGEAAPCLIDYFPRDLLVLIDESHQTVSQIGAMYRGDR
ARKETLVNFGFRMPSALDNRPLKFVEFEEMVPQAVFVSATPAEYELQKSKGVVVEQIIRP
TGLTDPEVETRPAGNQVDDLLEEVRVRVSRNERVLVTTLTKRMAEDLTEYYSDVGVKVRY
LHSDIDAIQRMAIIRDLRRGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHVSL
IQTIGRAARNVNGRVIMYSDQMTDSMKRAMEETARRRDIQRAYNKEHGITPRSVKSNITD
FTENIPDYDAGAGALPMAAEGENDLLEPKEIQRLIKEFTADMLKAADEMQFEKAAEFRDR
VQLLKDMDLGLKPASRSLLRAPAKAADQPGTTPKKGRGRGRPSASGGGSSGGSSGAAKPA
ARSRSRKN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgttagatctgtcctctatgccggacttcgaactcgtcagtgagcacaagccgcagggc
gaccagccaagggccatcggagagctgaccgagggcctgcttcgcggcgaccgctaccag
accctcctgggcgtcaccggctcgggaaagacgttcacgatggcgaacctcatcgccaac
gtgaagcgcccctcgctggtcatcgcgcacaacaagacgctggcggcgcagctgtacggc
gagttcaaggcgctcttcccgaacaacgccgtcgagtacttcgtctcgtactacgactac
taccagcccgaggcctacgtcccgtcgacggacaccttcatcgagaaggactcgtccatc
aacgacaacatcgaacggatgcgccactcggcgacgcacagcctgcgcacccgcaacgac
gtcatcatcgtggccagcgtgtcctgcatctacggcctgggcgccgcgcgcagctatgtg
gacctggccatccgcgccgccgtgggcgaggagatgggccgcgacggcttcatgcgcaag
ctggtggaggcccagtacgagcgcaacgacctggacttccaccgcggcaccttccgcgcc
cgcggtgacaccgtggaggtgttccccgcctacgaggaagagcgcgccgtgcgcgtcagc
ttcttcggcgacgaggtggagcgcatcaccgagttcgacccgctgcgcggccagacgctg
ggccagttggagaagatcgtcatcttccccgccagccactacgtcgccggagccgacgcg
cgccagaacgccatgcgcaccatccgcgaggagctggccgagcagctccagaagttcaag
gcggagggcaagctgctggaggcgcagcggctggagcagcgcaccatgttcgacctggag
atgattgaacaggtcgggtactgcaacggcatcgagaactactcgcgccacttcaccggg
cgcgcgccgggggaagcggccccgtgcctcatcgactacttcccgcgcgacctgctggtg
ctcatcgacgagagccatcagacggtgtcccagattggcgccatgtaccgcggcgaccgc
gcccgcaaggagacgctggtcaacttcggcttccgcatgcccagcgcgctggacaaccgg
ccgctgaagttcgtcgagttcgaggagatggtcccccaggccgtcttcgtctccgcgacc
cccgccgagtacgagctgcagaagtccaagggcgtggtggtggagcagatcatccgcccc
accggcctcacggacccggaggtggagacgcgccccgccggcaaccaggtggacgacctc
ttggaagaggtccgcgtgcgcgtgtcgcgcaacgagcgcgtgctggtgacgacactcacc
aagcgcatggcggaggacctcaccgagtactacagcgacgtgggcgtgaaggtccgctac
ctgcactcggacatcgacgccatccagcgcatggccatcatccgcgacctgcgccggggc
gagttcgacgtgctcgtgggcatcaacctgctgcgtgaaggcctggacatcccggaggtg
tcgctcgtggccatcctggacgccgacaaggaaggcttcctgcgcagccacgtgtcgctc
atccagaccattggccgcgcggcgcgcaacgtgaacgggcgcgtcatcatgtattcggat
cagatgaccgactccatgaagcgcgccatggaggagacggcccgccgccgcgacatccag
cgcgcgtacaacaaggaacacggcatcacgccgcggtcggtgaagagcaacatcaccgac
ttcacggagaacatcccggactacgacgcgggcgcgggcgcgctgcccatggcggcggaa
ggggagaacgacctcctggagcccaaggagatccagcgcctcatcaaggagttcaccgcc
gacatgctcaaggccgcggacgagatgcagttcgagaaggccgctgagttccgcgaccgc
gtccagctgctcaaggacatggacctggggctcaagcccgcctcgcgttcgctcttgcgc
gcgccggccaaggccgcggatcagcccggcaccacgccgaagaaggggcgtggacgcgga
cgtccctccgcatcgggtggcggttcttctggcggttcctccggcgcggcgaagcccgcg
gcccgttctcggtcacgcaagaactag
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