Corallococcus coralloides: COCOR_05462
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Entry
COCOR_05462 CDS
T01780
Symbol
tmk1
Name
(GenBank) thymidylate kinase
KO
K00943
dTMP kinase [EC:
2.7.4.9
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00240
Pyrimidine metabolism
ccx01100
Metabolic pathways
ccx01232
Nucleotide metabolism
Module
ccx_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
COCOR_05462 (tmk1)
Enzymes [BR:
ccx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.9 dTMP kinase
COCOR_05462 (tmk1)
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Gene cluster
GFIT
Motif
Pfam:
Thymidylate_kin
CbiA
AAA_17
MobB
AAA_18
SRP54
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFE10508
UniProt:
H8MZ26
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Position
6881237..6882949
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AA seq
570 aa
AA seq
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MFIDFEGIDGSGKTTLSNLLASRLKRLGYKVAHAREGGELQSPTARRIRDLTRDARLLEM
GPRAEFFLNLARDAQQLEEVIAPALKRGEVCITDRYLYSQLALTGGGRGLKEEQLLPSCE
LASQGLWPDLVILVDVDPDLARLRKRLGKVQSGKVNDADSRKGLVGAGLAVRVREAFLAQ
ARKDPARWIILENNDQPLRVLEQRLVEAVVARLEGREQPVQRLVPAPTPPAPGAVSVDDV
EERFFQAVDSLEAREPQLAAWLLNGIPGLPAHQRRLAYAERLPGLVARSLNGLDDDTAWT
LRDVLSASVPVDVAEGLGFVTSPRSHVLRQRLYAQAPAAVLEGLKRQDSPEAWALRERGL
KDGHMAAVLLGLAGVDGEESWVVREAGMQRKLYSEVARSLGGLSTERAEALREALIPHDR
LAVLKSTTGLETPVAVGLREQLEKGALKLVLRSLTGVDTPRAWAMRERGAQSTKEALDSV
DGMDSPAAWKLRASAARRWPATVVSSMRGLPLVAETRALLERILEEQAGKLPVLRNAYAV
VAQARALEQAQRPARALAETLGVDAGRQEA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgttcatcgatttcgaaggcattgacggcagcggcaagacgacgctgtccaacctgctc
gcgtcccggctgaagcggctgggctacaaggtcgcgcacgcgcgcgagggcggcgaactg
cagtcgcccaccgcgcggcgcatccgcgacctgacgcgcgacgcgcggctcctggagatg
gggccgcgcgccgagttcttcctgaacctggcccgcgacgcgcagcagctggaagaggtc
atcgcgcccgcgctgaagcggggcgaggtgtgcatcaccgaccgctatctctactcgcag
ctggcgctgacgggcggcgggcggggcctgaaagaggagcagctgctgccttcctgcgag
ctggcctcgcagggactgtggccggacctggtcatcctggtggacgtggacccggacctg
gcgcggctgcgcaagcggctgggcaaggtgcagagcggcaaggtgaacgacgcggacagc
cgcaagggcctggtcggcgcggggctggcggtgcgcgtgcgcgaggcgttcctggcgcag
gcccggaaggatccggcgcggtggatcatcctggagaacaatgatcagccgctgcgcgtg
ctggagcagcgcctggtggaggccgtggtcgcacggctggagggccgtgagcagccggtg
cagcggctggtccccgcccccaccccgccggcaccgggcgcggtgtccgtggacgacgtg
gaggagcgcttcttccaggcggtggacagcttggaggcgcgcgagccgcagctggcggcg
tggctgctcaacggcatcccaggcctgcccgcgcaccagcgccggctggcgtacgcggag
cggctgccgggcctggtggcgcgcagcctgaacgggctggatgacgacacggcgtggacg
ctgcgcgacgtgctgtcggcgagcgtgccggtggacgtggcggaggggctggggttcgtg
acgtccccgcgctcgcacgtgctgcggcagcggctgtacgcgcaggcgccggcggcggtg
ctggaggggctcaagcggcaggattcgccggaggcgtgggcgctgcgcgagcggggcctg
aaggacgggcacatggcggcggtgctgctgggcctggccggcgtggacggcgaggagtcc
tgggtggtccgcgaggcgggcatgcagcgcaagctgtactcggaggtggcgcgcagcctg
ggcgggctgagcacggagcgcgcggaggcgctgcgcgaggcgctgattccgcacgaccgg
ctggcggtgctgaagagcaccacggggctggagacgccggtggcggtgggcctgcgtgag
cagttggagaagggagcgctgaagctggtgctgcgctcgctgaccggcgtggacacgccg
cgggcctgggcgatgcgtgagcgcggcgcgcagtccaccaaggaggcgctggactccgtg
gacgggatggactcgccggccgcgtggaagctgcgggcgtccgcggcgcgccggtggcct
gcaacggtggtgtcgtcgatgcgcgggctgccgctggtggcggagacgcgggcgctgttg
gagcgcatcctggaggagcaggccgggaagctgccggtgctgcgcaacgcgtatgcggtg
gtggcgcaggcccgggcactggagcaggcgcagcggccggcgcgggccctggcggagacg
ctgggagtggacgccgggcggcaggaggcatga
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