Entry |
|
Name |
(GenBank) squalene/phytoene synthase
|
KO |
|
Organism |
ccx Corallococcus coralloides
|
Pathway |
ccx00909 | Sesquiterpenoid and triterpenoid biosynthesis |
ccx01110 | Biosynthesis of secondary metabolites |
|
Brite |
KEGG Orthology (KO) [BR:ccx00001]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
COCOR_05517
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
COCOR_05517
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:ccx01006]
COCOR_05517
Enzymes [BR:ccx01000]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
COCOR_05517
Prenyltransferases [BR:ccx01006]
Terpene biosynthesis
Squalene/phytoene synthase
COCOR_05517
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
complement(6937872..6938843)
|
AA seq |
323 aa
MSDAPTATALPFRDDELADFLVRTSRTFALAIPLLDEPLRREVGLGYLLLRVADTLEDAA
PWSRDERREALAAFEALLQEKPGTDAGALSREWLARRPSENAGYLDLLARTPTLLASLDA
LRPEAGAILRHFVLKTVQGMGQVLAGASEGGLLKLGSLQSLRDYCYIVAGLVGELLTELF
VLDPRLAPYAPNLRSLAPLFGEGLQLVNILKDARQDRKEGRVWLPDGVQLQDVEQLAGQD
LIAAARYVRSLFLAGAPRDMLAFTTLPLLLAQATLELLVRDGAGAKVSRAVVTAQMDTLH
AALERGTLPEAVEALAGPVPGGP |
NT seq |
972 nt +upstreamnt +downstreamnt
ttgagtgacgcccccaccgcgacggcccttccgttccgggatgacgagctggcggacttc
ctcgtgcggaccagccgcacgttcgcgctcgccatcccgctgctcgacgagccgcttcgc
cgcgaggtgggcctgggctacctgctgttgcgcgtcgccgacacgctggaggacgccgct
ccctggtcgcgcgacgagcggcgggaggccctggccgccttcgaggccctgctccaggag
aagccgggcacggacgccggggcgctgtcgcgcgagtggctggcgcgccgtcccagcgag
aacgcgggctacctggacctgctcgcgcgcacgcccacgctgctggcgagcctggacgcg
ctgcgcccggaggccggcgccatcctgcgccacttcgtgctgaagacggtgcagggcatg
gggcaggtgctggccggcgcgtccgaaggcgggctgttgaagctcgggtcgctccagtcc
ctgcgtgactattgctacatcgtggcgggactggtgggcgagctgctcacggagctgttc
gtcctggatccgcgcctcgcgccgtacgcgccgaacctgcgctcgctggcgccgctgttc
ggcgaggggctccaactggtcaacatcctcaaggacgcgcgccaggaccggaaggagggc
cgcgtgtggctgccggacggcgtgcagctccaggacgtggagcagctcgcgggccaggac
ctgatcgccgcggcgcgctacgtgcgctcgctgttcctggcgggagcaccccgggacatg
ctcgccttcaccacgctgccgctgctgctggcccaggccaccctggagctgctggtgcgc
gacggcgcgggcgccaaggtgtcgcgcgcggtggtgaccgcccagatggacaccctccac
gccgcgctcgaacggggcacgctccccgaggccgtggaggccctggccgggcccgtgccg
ggcggtccctga |