Corallococcus coralloides: COCOR_05597
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Entry
COCOR_05597 CDS
T01780
Symbol
gyrA1
Name
(GenBank) type II DNA topoisomerase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccx03032
]
COCOR_05597 (gyrA1)
03400 DNA repair and recombination proteins [BR:
ccx03400
]
COCOR_05597 (gyrA1)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
COCOR_05597 (gyrA1)
DNA replication proteins [BR:
ccx03032
]
Prokaryotic type
DNA Topoisomerases
COCOR_05597 (gyrA1)
DNA repair and recombination proteins [BR:
ccx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COCOR_05597 (gyrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIP1_clath_bdg
Motif
Other DBs
NCBI-ProteinID:
AFE09019
UniProt:
H8N0U2
LinkDB
All DBs
Position
7032424..7034802
Genome browser
AA seq
792 aa
AA seq
DB search
MLAEADTKSRKKQGGPAGGGGKGGGGGAGAGGGDGLPAGLAEEARRRYLNYALSVITSRA
LPDVRDGLKPVQRRILYGMWNDLNLSFDTKYQKCAQVVGAIMGRYHPHGDTAIYDALVRM
AQDFSLRYPLVDGHGNFGSLDGDSAAAYRYTECRLEKLATELLGELDSKTVRFRPNYDGT
RDEPVVIPARVPQLLMNGTTGIAVGMATNIPPHHLGELVDALLALINDPELQTKDLLKWI
KGPDFPTGGQILNDKKELREIYETGQGSVRIRGEYKLEEMKRGGQMIVVTSIPYTVNKST
LVAKIGELVRDRKLPLITDVRDESTKDVRIVLEVKKDANPELVMAYLYKHTPLQTNFGVN
LTCLVPSENPDVGTPKRLDLKSILRYFLDFRLEIVTKRFEHELAELKRRVHILEGFEKAY
DALDEIIRIIRQSEGKQDAAQKLMTRFKMDELQVDAILEMRLYKLARLEILIVQKELKEK
RAEIKRIEGILKDVKKRWAVIHDELTGLKAAYTDKRRTRIGGAGAEEMEFSAEAFIADED
AHVVITRDGWIKRVREVKDPSTTRLREGDAVMAVLAGSLKANLVLFSNFGTAYVTRFNDV
PASTGYGDPVQKLFKFDDGERVVGALSQDARLPQPEKLVAVTRQGLGLRFLLAPHTEVST
RAGRRYAKTGEGDEIIGTQPVGDKDLLAVLTEKTNALVCKVAEVNELAGPGKGVQVIKVD
AGDKVVDFLAAPASQKDAVLEFETQKGRKLHLSPAKFSVTGRGGKGHEMSKRDTVKEVAR
PVTFVPLPEKKE
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagaagccgatacgaagtcgcgcaagaagcagggaggcccggcagggggcgga
ggaaagggaggcggcggcggggccggcgccggtggcggggacggcctgcccgcgggcctg
gccgaggaagcgcgccgccgctacctgaactacgccctgtcggtcatcacctcgcgcgcc
ctgcccgacgtgcgcgacggcctcaagccggtgcagcgccgcatcctctacggcatgtgg
aacgacctgaacctgtcgttcgacacgaagtaccagaagtgcgcgcaggtggtcggcgcc
atcatgggccgctaccacccgcacggcgacacggccatctacgacgcgctcgtgcgcatg
gcgcaggacttctccctgcgctacccgctggtggacggccacggcaacttcggctcgctg
gacggcgactccgccgccgcctaccgctacaccgagtgccgcctggagaagctggccacg
gagctcctgggtgagctggacagcaagacggtccgcttccgccccaactacgacggcacc
cgcgacgagcccgtcgtcatcccggcgcgcgtgccgcagctgttgatgaacggcaccacc
ggcatcgcggtgggcatggccaccaacatcccgccccaccacctgggcgagctggtggac
gcgctcctggcgctcatcaacgacccggagctgcagaccaaggacctgctcaagtggatc
aaggggccggacttccccaccggcgggcagatcctcaacgacaagaaggagctgcgcgaa
atctacgagacgggccagggatccgtccgcatccgcggcgagtacaagctggaggagatg
aagcgcggcggtcagatgatcgtcgtcacctccatcccatacacggtgaacaagtccacg
ctcgtcgcgaagattggcgagctggtgcgcgaccgcaagctgcccctcatcaccgacgtg
cgcgacgagtccaccaaggacgtgcgcatcgtgctggaggtcaagaaggacgccaacccc
gagctggtgatggcgtacctctacaagcacacgcccctgcagacgaacttcggcgtgaac
ctgacgtgcctcgtgccgtcggagaacccggacgtcggcacgcccaagcgcttggacctc
aagtccatcctccgctacttcctcgacttccgcctggagatcgtcaccaagcggttcgag
cacgagctggcggagctcaagcggcgcgtccacatcctcgagggcttcgagaaggcctac
gacgcgctggatgagatcatccggatcatccgccagtcggaaggcaagcaggacgccgcc
cagaagttgatgacgcgcttcaagatggacgagctccaggtggacgccatcctggagatg
cgcctctacaagctggcccgtctggagatcctcatcgtccagaaggagctcaaggagaag
cgcgcggagatcaagcgcatcgagggcatcctcaaggacgtgaagaagcgctgggccgtc
atccacgacgagctgaccggcctcaaggccgcgtacaccgacaagcgccgcacgcgcatt
ggcggcgcgggcgcggaggagatggagttctccgcggaggcgttcatcgcggatgaggac
gcccacgtcgtgattacccgcgacgggtggatcaagcgcgtgcgcgaggtgaaggacccg
tccaccacccgcctgcgtgaaggcgacgcggtgatggcggtgctcgccggcagcctgaag
gcgaacctggtgctcttcagcaacttcggcaccgcctacgtcacccgcttcaacgacgtg
ccggcctccaccggctacggcgacccggtgcagaagctgttcaagttcgacgacggcgag
cgcgtggtgggcgccctgtcccaggatgcccgcctgccccagccggagaagctggtggcg
gtgacgcgccagggcctgggcctgcgcttcctcctggcgccgcacacggaggtgtccacc
cgcgccggccgccgctacgcgaagacgggcgagggcgatgaaatcatcggcacgcagccg
gtgggcgacaaggacctgctcgccgtcctcacggagaagaccaacgccctcgtctgcaag
gtggcggaggtgaatgagctggcgggtcccggcaagggcgtccaggtcatcaaggtggac
gcgggcgacaaggtggtggacttcctcgcggcgcccgccagtcagaaggacgccgtgctg
gagttcgagacgcagaagggccgcaagctgcacctgtcaccggcgaagttcagcgtgacg
ggccgcggcggcaagggccacgagatgtccaagcgcgacacggtgaaggaggtggcgcgt
cccgtcaccttcgtgccgctgccggagaagaaggagtag
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