Corallococcus coralloides: COCOR_06021
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Entry
COCOR_06021 CDS
T01780
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_06021 (truB)
Enzymes [BR:
ccx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
COCOR_06021 (truB)
Transfer RNA biogenesis [BR:
ccx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
COCOR_06021 (truB)
Prokaryotic type
COCOR_06021 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFE10553
UniProt:
H8MKY8
LinkDB
All DBs
Position
complement(7595415..7596278)
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AA seq
287 aa
AA seq
DB search
MDGVLVIDKPLGPTSFDVVRQVRGLLKVKKAGHTGTLDPMATGVLPVCLGEATKVAGIIT
EGDKAYDAVVRLGIETDTQDAQGKPTSEAPVPPLTAPLLEAVLARFRGTFDQVPPMYSAV
KVAGKRLYELARAGEEVERASRTVTVHELVLRDFSADRLTLSVRCTKGFYVRTLAYDLGR
ALGCGAHLEALRRTMSGPFTLARALPLGDLASLSREAVAGRLVSLADALTDLPAVRVSAD
EARRVLHGVPVEVAPMPGRVRVLGPDDVLLAMAEVVGGRLRYQRVFN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgttctcgtcatcgacaagcccctgggccccacgtccttcgacgtggtccgc
caggtgcgtggcctgctgaaggtgaagaaggcgggccacacgggcacgctggaccccatg
gccaccggcgtgctgccggtgtgcctgggcgaggccaccaaggtcgccggcatcatcacg
gagggcgacaaggcctacgacgccgtggtgcggctgggcatcgagacggacacccaggac
gcccagggcaagcccacctcggaggccccggtgcccccgctgacggccccgctcctggag
gcggtgctcgcccggttccgggggacgttcgaccaggtgccgcccatgtactcggcggtg
aaggtggccgggaagcggctctacgagctggcgcgcgccggggaagaggtggagcgggcc
agccgcaccgtcaccgtgcacgagctggtgctgcgcgacttctccgcggaccggctgacc
ctgtccgtgcggtgcaccaagggcttctacgtgcgcacgctggcgtacgacctgggccgc
gcgctgggctgtggcgcgcacctggaggcgctgcggcgcaccatgagcggccccttcacc
ctggctcgcgcgctgcccctgggggacctggcgtccctgtcgcgtgaagcggtggccggg
cggctggtgtcgctggcggacgcgctgacggacctgccggcggtccgggtgagcgcggac
gaggcccggcgggtgctgcacggcgtccccgtggaggtcgcccccatgccgggccgggtg
cgggtgctgggcccggatgacgtgctgctcgccatggcggaagtggtgggcggacggctg
cggtaccagcgggtgttcaactga
DBGET
integrated database retrieval system
