Corallococcus coralloides: COCOR_06097
Help
Entry
COCOR_06097 CDS
T01780
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00470
D-Amino acid metabolism
ccx00550
Peptidoglycan biosynthesis
ccx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
COCOR_06097 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
COCOR_06097 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccx01011
]
COCOR_06097 (murD)
Enzymes [BR:
ccx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
COCOR_06097 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccx01011
]
Precursor biosynthesis
Amino acid ligase
COCOR_06097 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_7
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AFE09532
UniProt:
H8MMB4
LinkDB
All DBs
Position
complement(7689543..7690913)
Genome browser
AA seq
456 aa
AA seq
DB search
MNPSLSGRKVAVFGLAKSGVAALRLLVQHGAKVTALDARSEDALGDVAKELHAKGVTLVT
GATPPGLLTRQDLVVVSPGVPLSLPELEAARTSGVPVWGEIELAGRLLTGTRFLGITGTN
GKSTTTALTGELYAKADLRTFVGGNLGRPLAEAAMSPGDWDALVVELSSFQLEGIHQLKP
TGAAILNLTPDHLDRYANHAEYGAAKARIFMNQDAGSDFAVVNADDAAVMGLAASARAPV
YGFSLTGRPVVDAPKLAGLAIARPGGFELEFAGESYTLTNRSLRGAHNAQNAMAAALLAR
LGGVAKDAVQAGLDSYPGLAHRLESVRVLDGVEWVNDSKATNVDSVLVALKAFAGDVWLI
AGGKGKGAPYAPMVEAGQGKVKGVLTIGQDADALARAYANDAPVHACGTLAQAVAKAREV
ARAGDTVLLSPACASYDQFKNFEDRGDTFKRLVGAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctcgctgtccggtcggaaggtcgcggtgttcgggctggccaagagcggcgtc
gcggcgctgcggctgctggtccagcacggcgcgaaggtgacggcgctggatgcgcgctcc
gaggacgcgctcggcgacgtcgcgaaggagctgcacgcgaagggcgtgacgctcgtcacc
ggcgccacgcccccggggctgctcacccgccaggacctggtggtggtgagcccgggcgtg
ccgctgtccctgccggagctggaggccgcgcgcacgtcgggcgtgcccgtctggggcgag
attgagctggcgggccgcctcctcacgggcacccgcttcctgggcatcaccggcaccaac
ggcaagagcaccaccacggcgctcaccggcgagctgtacgcgaaggcggacctgcgcacc
ttcgtgggtggcaacctggggcgcccgctggccgaggccgccatgtcccccggggactgg
gacgcgctggtggtggagctgtccagcttccagctggagggcatccaccagctcaagccc
acgggcgcggccatcctcaacctcacgccggaccacctggaccgctacgccaaccacgcc
gagtacggcgcggccaaggcgcgcatcttcatgaaccaggacgccggcagcgacttcgcc
gtggtgaacgcggacgacgcggcggtgatggggctggccgcctccgcgcgcgcgcccgtg
tacggcttcagcctcacgggccgcccggtggtggacgcgccgaagctggcggggctggcc
atcgcgcggcccggcggcttcgagctggagttcgcgggcgagtcctacacgctcaccaac
cgctcgctccggggcgcgcacaacgcgcagaacgcgatggcggcggcgctgctggcccgg
ctgggcggcgtggcgaaggacgcggtgcaggcgggcctggacagctacccgggcctggcg
caccggctggagagcgtgcgcgtgctggacggcgtggagtgggtgaacgactccaaggcc
accaacgtggactccgtgctggtggcgctcaaggccttcgccggtgacgtgtggctcatc
gcgggcggcaagggcaagggcgcgccgtacgcgcccatggtggaggcggggcagggcaag
gtgaagggcgtgctcaccattggccaggacgcggacgcgctggcgcgggcgtacgcgaac
gacgcgccggtgcacgcgtgcggcacgctggcccaggcggtggcgaaggcgcgtgaggtg
gcgagggcgggggacacggtcctcttgtccccggcgtgcgcgtcgtacgatcagttcaag
aacttcgaggaccggggcgacacgttcaagcgcctcgtcggggcgctctga
DBGET
integrated database retrieval system
