KEGG   Corallococcus coralloides: COCOR_06135
Entry
COCOR_06135       CDS       T01780                                 
Symbol
lcrD1
Name
(GenBank) FHIPEP family type III secretion protein
  KO
K03230  type III secretion protein V
Organism
ccx  Corallococcus coralloides
Pathway
ccx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    COCOR_06135 (lcrD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ccx02044]
    COCOR_06135 (lcrD1)
Secretion system [BR:ccx02044]
 Type III secretion system
  Type III secretion core apparatus
   COCOR_06135 (lcrD1)
SSDB
Motif
Pfam: FHIPEP Borrelia_P13
Other DBs
NCBI-ProteinID: AFE09194
UniProt: H8MMF2
LinkDB
Position
complement(7734076..7736154)
AA seq 692 aa
MMPPFLKVLLKARQSSDVMLAVAMAAVLGALIIPLPAWLLDMGLAVNLAAAVALLVAALN
AKDALRVTSFPTLLLFTTLFRLSLNVSSTRLALSEGHAGEVIQAFGEFVVRGDYVVGAVV
FAILTLVQLLVVTKGAERVAEVSARFTLDAMPGKQMSIDADLRAGAIDQTQARRRRRDLE
RESQMFGAMDGAMKFVKGDVIAGLVIVAVNLLGGTLIGVLQNGQSFSEAAATFALIAIGD
GLVSQIPSLCIAVAAGLVVTRVASEKEEDSLGAEIGSQFFGDFRTLTTVAGLCVALALMP
GMPHLTFLSLAAGLGGLGYALRRKGQAPEKSLAKDGASSEAAVPAGAAGKPPESAKAPVG
VTPLTLDLSAQLTPLAEADGGAFVHTVLNAVRDELFFELGVRIPGIRVRTHAAYLGPGEY
RILLDEVPAGGGVVQPGALYALVPPGELAFLEVQAEASVEPASGRPISRVGEGARSRLEL
AQVPVRKPSELIADHLRAVLRLRAAALLGLQEVQGLLEGLEAQSPVLVKEALQKVPLPLL
VDVLRRLVQEQVSIRDLRAILEALVAPTTEGDATALAERCRQALHRYLSHQFAPTGPLYA
YLVDPEVEEVLRASGPRGLAPEPERIMEILEGVRVIANGGRAVVLAAPDIRRPLRKLCEG
PFPDVAVLTYGELDGDLQIRPIGRLSPVAVGR
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgatgcccccattcctgaaggtcttgctgaaggcccgtcagtcctcggacgtcatgctc
gcggtggcgatggcggcggtgctgggggcgctcatcatcccgctgccggcgtggctcctc
gacatggggctcgcggtgaacctggccgcggcggtggcgctgctggtcgcggcgctgaac
gcgaaggacgcgctgcgggtgacgtcgttccccacgttgctgctgttcaccacgctgttc
cggctgtcgctcaacgtgtcgtccacgcggctggcgctctccgagggccacgcgggcgag
gtcatccaggccttcggcgagttcgtggtgcgaggcgactacgtggtgggcgcggtggtg
ttcgccatcctcacgctggtgcagttgctggtggtgaccaagggcgccgagcgggtggcg
gaggtgtccgcccgcttcacgctggacgccatgcccggcaagcagatgtccatcgacgcg
gacctgcgcgcgggcgccatcgaccagacccaggcccggcgcaggcggcgcgacctggag
cgcgaatcccagatgttcggtgccatggacggcgcgatgaagttcgtgaagggggatgtc
atcgcgggcctggtcatcgtcgcggtgaacctgctgggcggcaccctcatcggcgtgttg
cagaacggccagtccttctccgaggccgccgccaccttcgcgctcatcgccatcggcgac
gggctcgtgtcccagataccttcgctgtgcatcgcggtggccgcgggtctcgtcgtcacg
cgggtggcatcggagaaggaagaagactcgctcggggcggagatcggctcccagttcttc
ggtgacttccgcacgctgaccaccgtcgcgggcctgtgcgtcgcgctggccttgatgccg
ggcatgccgcacctgaccttcctctcgctggcggcgggcctgggcgggctcgggtatgcg
ctgcggcgcaagggccaggcgccggagaagtcactggcgaaggatggcgcctcctcggag
gccgcggtgcccgctggagccgctggcaagccgccggagagcgcgaaggctccggtcggg
gtgacgccgctcacgctggacctgtccgcgcagctgacgccgctcgcggaggcggacgga
ggcgccttcgtgcacacggtgctgaacgccgtgcgcgacgagctgttcttcgaactgggc
gtgcgcatccctggcatccgggtgcggacccacgccgcctacctgggccccggcgagtac
cgcatcctcctggacgaggtgcccgcaggtggcggcgtggtgcagcccggcgccctgtac
gcgctcgttcctccgggtgagctggccttcctggaggtccaggcggaggcgtcggtggag
cccgccagcgggcggcccatcagccgcgtgggggagggcgcccgctcgcggctggagctg
gcccaggtgccggtgcgcaagccctcggagctcatcgcggaccacctgcgggccgtgctg
cgcctgcgcgccgccgcgctgctgggactccaggaggtgcagggactgctggaggggctg
gaggcccagtcgcccgtgctggtgaaggaagcgctgcagaaggtgccgctgccgctgctg
gtggacgtgctgcggcggctcgtgcaggaacaggtgagcatccgcgacctgcgcgccatc
ctggaggcgctcgtggcgcccaccacggaaggcgacgccacggccctggccgagcgctgc
cgtcaggccctgcaccgctacctgagccaccagttcgcgcccacgggcccgctgtacgcg
tacctcgtggatccagaagtggaggaggtgctgcgcgccagcggtccccgagggctcgcg
ccggagccggagcgcatcatggagattctggaaggggtgcgggtcatcgccaacggcggc
cgggcggtggtgctcgcggccccggacatccgccgtccgctgcgcaagctgtgcgaaggc
ccgttcccagacgtggcggtgctcacctacggcgagctggacggagacctgcagattcgc
cccatcggccggctgtcgccggtcgccgtggggcggtga

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