Corallococcus coralloides: COCOR_06637
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Entry
COCOR_06637 CDS
T01780
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
ccx
Corallococcus coralloides
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Epimerase
PP-binding
AMP-binding_C
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AFE09208
UniProt:
H8MW92
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All DBs
Position
8341728..8344736
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AA seq
1002 aa
AA seq
DB search
MALPSTLRLPPTAEIAFGSTVLKQPELLRRASRVARRLRAEWNVRPGDRVGLMVVPGPEV
IPAILGIWMAGAAYVPLDPFLPDERLLRILRDAGLRGVVTQRMHRVSVGLLETWLGTPLP
FLEADATAVDGAEDIDVSDVIDAPPDRPAYLIYTSGSTGEPKGVVCTFRGLVNLVHGVGP
LLGLGPDTRHLQFASINFDASVWEVFPTLFAGGTVVQGTREDLLPGRRMAEYLRQQRVTH
LCLPPSVLGQLGPHVDTLPDVACVVMAGERCPAPLAERWHASGRRVFNAYGPTEGTVCAT
AYRVKGGESPVPIGQALPGVQLRVVGADGQDVTDGATGEVWIGGEGVAEGYRNQPERTRE
RFPTDARGARWYRTGDEAVRRADGALVFLGRMDQQVKLRGFRIELEAIEQALYAYPGVAQ
AAVTVFEHTDAQGQTTGLLVAYHSVQEGHTVSLDALRAHLGVVLPDYMVPHRFVALPRLP
LMPHLGKVDRAALPPPADWVGATASETRTAAPATPATPIDRLCRAFERGLRAAPGTVTAN
THFFQAGGDSLGVAHVLAQVEEDFGVSLPSRRVYSHPTPQLLLAFCEAGAVPAEAGPQGV
RATLLTDARSAALPRLTAPVLVTQPPRTLLLTGATGFLGIHLLAALAPRVERIHCLVRAR
DDAEAGARLRATARKYGVHLPWRDGRIQAVAGDITRTRLGLEASVHDALALQCDAVVHSA
ASISYILPYADAGRPNVAGTQQVLAFCAHGRAKPLHHVSSLSVHGAVGTLLGLEEVDEDF
ALERSLDLMSYENGYTRAKWVAERLAVDARDSGLPVSIYRPGFIQGHSRTGIGNADDMLC
RLLVGNAQLGMSPDLPDKYWLPVPVDYVASATAHLVLTQSPGGTYNLAPEREQEPSHNAL
FDMLGAHGHPVRRVAPAVWLRELGRVGPDNALFPLVAFLREKVYHGTRTVLELHHRTPRV
RTDHTRAALAGTDIQCPDIDAALLRRYVKDLFARHRSAALAA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggcccttccgtccacgctgcgtcttcccccgaccgcggagatcgccttcggatccacg
gtgctgaagcaaccggagctgttgcgccgggcgtcccgggtggcgcggcggctgcgggcc
gagtggaacgtgcggccgggagaccgcgtggggctgatggtggtgcccgggccggaggtc
atcccggccatcctgggcatctggatggcgggcgcggcctacgtgccgttggatcccttc
ctccccgacgagcggctcctgcgcatcctgcgtgacgcgggcctgcgaggcgtcgtcacg
cagcgcatgcaccgcgtctccgtggggctcctggagacgtggctggggactcccctgccc
ttcctggaggcggatgcgacggcggtggatggcgcggaggacatcgacgtctcggacgtc
atcgacgcgccgccggaccggcccgcctacctcatctacacctccggcagcacgggtgag
cccaagggcgtggtgtgcacgttccgggggctcgtgaacctggtgcacggcgtggggccg
ctcctgggcctggggccggacacgcggcacctccagttcgccagcatcaacttcgacgcg
tccgtgtgggaggtgttccccacgctgttcgcgggcggcaccgtggtgcagggcacgcgc
gaggacctgctgcccggccggcgcatggcggagtacctgcgccagcagcgcgtgacccac
ctgtgcctgccgccgtccgtgctggggcagctggggccgcacgtggacacgctgccggac
gtggcgtgcgtggtgatggcgggcgagcgctgcccggcgccgctcgcggagcggtggcat
gcatccggccgccgcgtcttcaacgcctacggccccacggaggggacggtctgcgcgacc
gcgtaccgggtgaagggcggcgagtcgcccgtgcccatcggacaggcgctgccgggcgtg
cagctgcgcgtggtgggagcggatggccaggacgtcaccgacggcgcgacaggcgaggtg
tggattggcggcgagggcgtggcggagggctaccgcaaccagcccgagcgcacgcgggag
cgcttccccacggacgcccggggcgcccggtggtaccgcaccggtgacgaggccgtgcgc
cgcgcggacggggcgctggtgttcctgggccggatggatcagcaggtgaagctgcgcggc
ttccgcatcgagctggaggccatcgagcaggcgctgtacgcgtacccgggtgtcgcgcag
gcggcggtgacggtcttcgagcacacggacgcgcagggccagacgacgggcctgctggtg
gcgtaccacagcgtgcaggagggccacacggtgtcgctggacgcgctgcgcgcgcacctg
ggcgtcgtgctgccggactacatggtgccgcaccgcttcgtggcgctgccgcgcctgccg
ctcatgccccacctgggcaaggtggaccgggcagcgctgccgcctccggcggactgggtg
ggcgccaccgcgtccgaaacccgcaccgccgcgcccgcgactcccgcgactcccatcgac
cggctgtgccgcgccttcgagcggggtctgcgcgcggctcctggcaccgtcacggcgaac
acgcacttcttccaggcgggcggtgactcgctgggcgtggcgcacgtgctggcccaggtg
gaggaggacttcggcgtgtcgctgccgtcgcgccgcgtgtactcgcaccccacgccccag
ctgctcctggccttctgcgaggccggcgcggtcccggccgaagcgggccctcaaggcgtg
cgcgccacgctgctgaccgacgcgcggtccgcggccctgccccggctcacggctcccgtg
ctcgtcacgcagccgccgcgcacgctcctgctcacgggggcgacggggttcctgggcatc
cacctgctggccgcgctggcgccccgcgtggagcgcatccactgcctggtgcgagcgcgc
gacgacgcggaagccggcgcgcggcttcgcgccaccgctcgcaagtacggcgtgcacctg
ccctggcgcgacgggcgcatccaggcggtggcgggcgacatcacccggacgcggctgggg
ctggaggcgtcggtccatgacgccctggcgctccagtgcgacgcggtggtgcactcggcc
gcgagcatcagctacatcctgccgtacgcggacgcggggaggcccaacgtcgccggcacg
cagcaggtgctggccttctgcgcgcacggccgcgcgaagcccctgcaccacgtgtcctcg
ctcagcgtccacggcgcggtgggcacgctgctgggcctggaggaggtggacgaggacttc
gcgctggagcgctcgctggacctgatgtcctacgagaacggctacacgcgggccaagtgg
gtcgcggagcggctcgccgtggacgcgcgcgacagcggcctgccggtcagcatctaccgg
ccgggcttcatccagggccacagccgcacgggcattggcaacgcggacgacatgctgtgc
cggctgctggtgggcaacgcgcagctgggcatgtcgccggacctgccggacaagtactgg
ctgccggtgccggtggactacgtggccagcgccaccgcgcacctggtgctcacccagtcc
ccgggcggcacgtacaacctggcgccggagcgcgagcaggagccgagccacaacgccctc
ttcgacatgctgggcgcgcacgggcacccggtgcgccgcgtggcgccggcggtgtggctg
cgcgagctggggcgggtggggccggacaacgccctcttcccgctggtcgcgttcctgcgg
gagaaggtctaccacggcacccgcacggtgctggagctgcaccaccgcacgccgcgcgtg
cgcacggaccacacccgcgccgcgctggcgggcacggacatccagtgcccggacatcgac
gcggccctgctgcgccgctacgtgaaggacctcttcgcgcgccaccgctccgcggccctc
gccgcgtag
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