KEGG   Corallococcus coralloides: COCOR_07742
Entry
COCOR_07742       CDS       T01780                                 
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ccx  Corallococcus coralloides
Pathway
ccx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    COCOR_07742 (recQ2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccx03019]
    COCOR_07742 (recQ2)
   03400 DNA repair and recombination proteins [BR:ccx03400]
    COCOR_07742 (recQ2)
Enzymes [BR:ccx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     COCOR_07742 (recQ2)
Messenger RNA biogenesis [BR:ccx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     COCOR_07742 (recQ2)
DNA repair and recombination proteins [BR:ccx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      COCOR_07742 (recQ2)
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII MarR_2 NADH_4Fe-4S Lipoprotein_20
Other DBs
NCBI-ProteinID: AFE10102
UniProt: H8MT95
LinkDB
Position
complement(9672100..9674028)
AA seq 642 aa
MRDDAVDVVLRERFGLESFRPGQREVLTKLLEPQGSALAVFPTGGGKSLCYQLPALLLEG
LTVVVSPLIALMKDQIDALERKGIRAARLDSSLSLEESREVTESLRDGTLKLLYVAPERF
NNERFMGLLSELQISLFAVDEAHCVSEWGHNFRPDYLKLAQAARTLQAERILALTATATP
QVVHDICQGFGIPESHAVVTGFYRNNLTLETTPTGPEARDALLVERLKSRPPGTTIVYVT
LQKTAERVAALLSAEGLPASAYHAGLEAEERERVQEAWTHSAKGIVVATIAFGMGIDKAD
VRAVYHYNLPKGLESYSQEIGRAGRDGRPSVVELLACPDDVPTLENFALGDTPLPEALTA
LVNELLSSGPELHLDMYALGNRHDLRPLVLRTALTYLELEGVLRQGTPFYAGYKVQPAGS
VDALVGRFQGERARFVKELFAHAKKGRTWYTFDPAEVAKALDQPRDRVVKALDYFQEQGY
AEVQVAEPRQRYTRLREREDAKALVALLQERFQKREVQEVSRVRDVLRLVTHDGCQSNAL
VAHFGEQREAPCGHCTFCRTGAARVLPPPHPRPDLREQLDAPTFQSLVARHPEALGHPRQ
AARFLCGLSSPALSKAKLGNHKLFGTVAEWPFAQVLAFCEAC
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcgggacgatgcggtggacgtcgtgttgcgagagcgcttcgggctggagtccttccgg
cccggacagcgcgaggtgctcacgaagctgctcgagccccagggctccgcgctcgccgtg
ttccccactggcggcggcaagtcgctgtgctaccagttgcccgcgctgctgctcgaaggg
ctcacggtggtggtgtcaccgctcatcgcgttgatgaaggatcagatcgacgcgctggag
cggaagggaatccgcgccgcgcggttggactcctccctgtcgctggaggagtcgcgtgaa
gtgacggagtccctgcgcgacggaacgctgaagctcctctacgtggcccccgagcgcttc
aacaacgagcgcttcatggggctcttgagcgagctccaaatctccctcttcgcggtagac
gaagcgcactgcgtctccgaatggggccacaacttccggccggactacctcaagctcgcg
caggcggcccgcacgctccaggccgagcgcatcctggcgctcaccgccacggccacgccg
caggtggtgcacgacatctgtcagggcttcggcatcccggagtcgcacgcggtcgtcacc
ggcttctaccggaacaacctcacgctggagaccacacccacgggcccggaggcgcgcgat
gccctgctggtggagcggctcaagtcgcgcccgcccggcaccaccatcgtctacgtcacg
ttgcagaagaccgcggagcgcgtggcggcgctcttgagcgcggagggcctgcccgcgagc
gcctaccacgcgggcctggaagccgaggagcgcgagcgggtgcaggaggcgtggacccac
tccgcgaagggcatcgtcgtggcgaccatcgcgttcgggatgggcatcgacaaggcggac
gtgcgcgccgtgtatcactacaacctgcccaagggcctggagagctacagccaggagatt
ggccgcgcgggccgtgatggcaggccgtccgtcgtggagctgctcgcgtgcccggacgac
gtgcccacgctggagaacttcgcgctcggagacacgccgctgccggaggcgctgacggcg
ctggtgaacgagctgttgtcctcgggaccggagctgcacctggacatgtacgcgctgggc
aaccgccacgacctgcggcccctggtgctgcgcacggcgctgacgtacctggaattggag
ggcgtgctgcgccagggcacgccgttctacgcgggctacaaggtgcagccggcgggctct
gtagacgcgctcgtgggcaggttccagggggagcgcgcgcgcttcgtgaaggagctgttc
gcgcacgcgaagaagggacgcacctggtacacgttcgaccccgccgaagtcgcaaaggcg
ttggaccagccgcgagaccgggtggtgaaggcgctcgactacttccaggagcagggctac
gcggaggtgcaggtggcggagccgcgtcagcgctacacgcggctgcgcgagcgcgaggac
gcgaaggcgctcgtggccctgttgcaggagcgcttccagaagcgggaggtccaggaggtg
tcgcgggtgcgcgacgtgctccggctggtcacgcacgacggttgccagagcaatgcgctg
gtggcccacttcggcgagcagcgcgaagcaccgtgcggccactgcaccttctgccgcacg
ggcgcggcgcgcgtgctgccgccgccgcatccacggccggacctgcgcgaacagctggac
gcgcccacgttccagtcgctcgtggcgaggcacccggaggcgctgggccatccccggcag
gcggcgcgcttcctctgcggcctgagcagccccgcgctctccaaggcgaagctcggcaat
cacaagctcttcggcaccgtggcggagtggccgttcgcccaggtgctggcgttctgtgag
gcgtgctaa

DBGET integrated database retrieval system