Corallococcus coralloides: COCOR_07898
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Entry
COCOR_07898 CDS
T01780
Symbol
pbpA
Name
(GenBank) putative penicillin-binding protein
Organism
ccx
Corallococcus coralloides
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MecA_N
Motif
Other DBs
NCBI-ProteinID:
AFE09738
UniProt:
H8MWF3
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All DBs
Position
complement(9848462..9850390)
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AA seq
642 aa
AA seq
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MYGRAVISWVGLCLLLLLPACAPRATKPAAPPTPAVVPGGAEDLALRYLDAWARNDVAAQ
RQMLVDAPQDFDAQHARWRQDLGVIASRFDPVVLESQDATTAVVRFHGVHVLRGLGDWEV
ESRLRFVLRNKRWSLRWTPEVFHPDARPGDRFGRTRSWGPRADLLDADGVPLTVPGEVIR
IGVMPGRVKDRAAVANVLQSQLGVDPAKVLAALNVSSAQPEQFLAFIDVRPERYQQLRPV
LAPVPGIFFRKRPARLSPAEGFAAHTLGRVGDITAEALQALGQPYQPGDMVGLSGLERAQ
ERTLAGRPSGEVRLQRRAGGSELLYRFDGEPGRAVRTTLRMDVQDAAEAALVDVTQPAAL
VAVDTKTGEVLAMASRPLGEGWHRALMGRYPPASTFKLVTATALLENGLKPDSRVDCPLE
VTVGRKRFRNFESEVLGVTTLRRTFALSCNTTFIQLSAKLDPRVLEDAARRFGFGVPYDV
GLPSPGATFPPPKDDAERAADAMGQGRVLVTPLHMATVVSAAATGVWHAPRLLADMEPGP
EARLNPSTTTMLRDLMRAVVTDGTAKSAASIPGLMGKTGTAEFGTSVPPETHAWFVGVRD
GIGFAVFVEGGGVGGRVALPLAIRFLQALDAPGAIAPPAGRM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgtacggacgggcggtcatttcctgggtggggctctgcctcctgttgctgcttcccgcg
tgcgcgccgcgagccacgaagcccgccgcgccacccacgcccgccgtggtgcccggcggc
gccgaggacctggccctgcggtacctggacgcctgggcgcgcaacgacgtggccgcgcaa
cgccagatgctcgtggacgcgccccaggacttcgacgcgcagcacgcgcgctggaggcag
gacctgggcgtcatcgcctcgcgcttcgacccggtggtgctcgaatcccaggacgccacc
acggcggtggtgaggttccacggcgtgcacgtgctgcgcggactgggggactgggaggtc
gagtcccgcctgcgcttcgtgctccgaaacaagcgctggagcctgcgctggacgccggag
gtattccatcccgacgcgcggcctggagaccgcttcggacgcacgcggagctggggccct
cgcgcggatctgctcgatgcggacggtgttccgctcaccgtgccgggagaggtgattcgc
atcggcgtgatgccgggccgggtgaaggaccgcgcggccgtggccaacgtgctccagtcg
cagctcggcgtggaccccgcgaaggtgctcgccgcgctgaacgtctcgagcgcgcaaccc
gagcagttcctcgcgttcatcgacgtgcgcccggagcgctaccagcagcttcgccccgtg
ctcgcgccggtgcctggcatcttcttccgcaagaggcccgcgcgcctcagccccgcggag
ggcttcgccgcgcacacgctgggccgggtcggggacatcacggcggaggcactccaggcc
ctgggccagccctaccagccgggcgacatggtgggcctgtccggcctggagcgcgcgcag
gagcggacgctggcgggacgcccctccggcgaggtgcggctccagcgccgtgccggcggc
agcgagctgctgtaccgcttcgacggggagccgggacgcgcggtgcgcaccacgttgcgc
atggacgtgcaggatgcggcggaggcggcgctcgtggacgtcacccagcccgccgcgctg
gtcgcggtggacacgaagacgggtgaggtgctggccatggccagccggccgctcggagag
gggtggcaccgcgcgctgatggggcgctatccgccggcctccacgttcaagctcgtgacc
gccacggcgctgctcgaaaacggcctgaagccggactcccgcgtcgactgtcccctggag
gtgacggtgggccgcaagcgcttccgcaacttcgaatccgaggtgctgggcgtcaccacg
ttgcggcggacgttcgcgctgtcgtgcaacacgacgttcatccagctctcggcgaagctg
gacccgcgcgtgctggaggacgcggcccggcgcttcggcttcggggtgccctacgacgtg
ggactgccgtcaccgggcgccaccttccctccgccgaaagacgacgccgagcgcgcggcg
gacgccatgggccaggggcgcgtgctcgtcactccgctgcacatggccaccgtcgtgtcg
gcggcggccaccggcgtctggcatgcgccgcgcctgctcgcggacatggagcctggcccg
gaggcgcggctgaacccgagcaccacgaccatgctccgcgacctgatgcgcgcggtggtg
acggacggcacggcgaagtccgccgccagcatcccgggcctcatgggcaagacgggcacg
gcggagttcggcacgtccgtgccgcctgaaacccacgcgtggttcgtcggcgtgcgtgac
ggcatcggcttcgcggtgttcgtggagggcggcggcgtgggcggccgcgtcgccctgccg
ctcgcgatccgcttcctccaggcgttggacgcgccgggtgcaatcgctccgccagcggga
cgtatgtag
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