Corallococcus coralloides: COCOR_08080
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Entry
COCOR_08080 CDS
T01780
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccx03016
]
COCOR_08080 (gidA)
03036 Chromosome and associated proteins [BR:
ccx03036
]
COCOR_08080 (gidA)
Transfer RNA biogenesis [BR:
ccx03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
COCOR_08080 (gidA)
Prokaryotic type
COCOR_08080 (gidA)
Chromosome and associated proteins [BR:
ccx03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
COCOR_08080 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
SAM_GIDA_C
GIDA_C_1st
FAD_oxidored
Pyr_redox_2
FAD_binding_2
ThiF
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AFE08904
UniProt:
H8MZP4
LinkDB
All DBs
Position
complement(10058304..10060145)
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AA seq
613 aa
AA seq
DB search
MELRYDIVVVGLGHAGCEAALACARMGLSTLGVTLKRERAAVMSCNPAVGGTAKGHLVRE
LDALGGQMGRAADLAGTHVKILNPSKGPAVQATRVLCDRDAYAAGMQAVLFTQPNLTVRE
GEVAAVVAEEGRVKGVVLGDGTQVVARAVLLTTGTFLRALMHVGEQKEVGGRLGDEAARG
LSESLHSLGFTLGRFKTGTPARLSRDSIDWDAVTPQPGDVGVRPLSWRTQLEQGLPFPRR
PSVMCGLTATTEATHRLLRDNLHRSPLFQGDIVGRGPRYCPSLEDKVVRFAARERHQVFL
EPEGPTSPLVYPAGLSTSMPADVQLEFLRTIPGLSRVEVVRYGYAVEYDYAPPTQLHPTL
ETKAVAGLFFAGQLNGTSGYEEAAFQGLWAGIQAALQVKGEPALVVGRDEAHGAVLVDDL
VTKGVDEPFRMFTSRSEHRLKLREGNADLRLARHGHRVGLLPKEALERAEARAQAVTAEV
ARLKRTGLAMRLKRPEVTYAQLAQEREDFPALTPDVAEEVEVEVKYEGYIAQAARAAARE
AEASDRWRIPDTFRFTDVRGLGTEAVEKLSAHRPGTVGQARRIPGLTPAAVSLLLVALKR
GQGPSSDQEQGCG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaactccgatacgacatcgtcgtggtgggcctgggccacgcgggctgcgaggcggcg
ctcgcgtgcgcgcgcatgggcctgtccaccctgggcgtgacgctcaagcgcgagcgcgcc
gccgtgatgagctgcaaccccgccgtgggtggcaccgccaagggccacctggtgcgtgag
ctggatgcgctcggtggacagatgggccgcgcggcggacctcgcgggcacgcacgtcaag
atcctcaatccctccaagggccccgccgtgcaggccacccgcgtcctctgcgaccgcgac
gcctacgccgccggcatgcaggccgtgctcttcacccaacccaacctcaccgtgcgcgag
ggcgaagtggccgccgtcgtcgcggaagaggggagggtgaagggcgtggtgctgggggat
ggcacgcaggtggtggcccgcgcggtgctcctcaccaccggcaccttccttcgcgcgctg
atgcacgtgggcgagcagaaggaggtcggcggccggctgggagacgaagccgcgcgcggt
ctatcggagtcgctgcattcactcggcttcacgctgggccgcttcaagacgggcacgccc
gcgcgcctgtcccgcgacagcattgactgggatgctgttactccgcagccgggggacgtg
ggcgtgcggccgttgtcctggcgcacgcagctggagcagggcctgccgttcccgcgccgg
ccctccgtgatgtgcggcctcaccgcgacgactgaggcgacgcaccggctgctgcgcgac
aacctgcaccgctcgccgctgttccagggggacatcgtggggcgagggccccggtactgc
ccgtcgctggaggacaaggtggtgcgcttcgccgctcgcgaacggcaccaggtgttcctc
gaaccggaggggcccacgtcgccgctggtgtacccggcgggcctgtccaccagcatgccc
gcggacgtgcagctggagttcctgcgcaccatcccgggcctgtcccgtgtggaggtggtc
cgctacggctacgcggtggagtacgactacgcgccgcccacgcagctgcaccccacgctg
gagacgaaggccgtcgcgggcctgttcttcgcgggccagctcaacggcacctccggctac
gaggaggccgccttccagggcctgtgggccggcatccaggcggcgctccaggtgaagggc
gaaccggcgctcgtcgtgggccgtgatgaggcgcacggcgcggtgctcgtggatgacctg
gtgacgaagggcgtggatgaaccgttccgcatgttcaccagccgctccgaacaccggctc
aagctgcgcgagggcaacgcggacctgcggctcgcgcggcacgggcatcgcgtggggctg
ttgccgaaggaggccctggagcgcgcggaggctcgggcccaggcggtgacggcggaggtc
gcgcggctcaagcgcaccggcctggccatgcggctcaagcgcccggaggtcacgtacgcg
cagctggctcaagagcgcgaggacttcccggcgctcacccctgacgtcgcggaggaggtg
gaggtggaggtgaagtacgagggctacatcgcccaggccgcccgggccgcggcgcgcgag
gcggaggcgtccgaccgctggcgcatcccggacacgttccgcttcacggacgtgcggggt
ctgggtacggaggcggtggagaagctgtccgcgcaccggcccgggacggtggggcaggcc
cggcggattccgggcctgacgcccgccgcggtgtccctgctcctggtcgcgctcaagcgg
gggcaggggccgtcaagtgatcaggaacagggctgtggataa
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