Campylobacter coli RM4661: YSS_00425
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Entry
YSS_00425 CDS
T03166
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YSS_00425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_00425
Enzymes [BR:
ccy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
YSS_00425
DNA repair and recombination proteins [BR:
ccy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YSS_00425
Prokaryotic type
YSS_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHK76063
LinkDB
All DBs
Position
complement(92475..93170)
Genome browser
AA seq
231 aa
AA seq
DB search
MKEITINIEDIKINNDWKEFLKEEFSKSYFLEIKKRYIQALNNKAIIYPPSNLTFNAFNL
TPLSELKIVLLGQDPYHQPNQAMGLSFSVPCGVKIPPSLLNIYKELKADLNIEPSKSGDL
SSWAKQGVLLLNSILSVEAGKPASHSSWGWQEFSDAIIHKLSNEKSGLVFMLWGNYAKSK
EILIDNAKHLILKAAHPSPLARTGFLGCKHFSKANEFLKKVDKIPIDWKIV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaattactataaacattgaagatatcaaaataaataatgattggaaagagttt
ttaaaagaagaatttagcaaaagttattttttagaaatcaaaaaacgctatatacaagct
ttaaacaataaagccattatctatcctccttcaaatttaacctttaatgcttttaatctt
actcctttgagcgagcttaaaattgtacttttaggacaagatccttaccatcaacccaat
caagctatggggcttagtttttctgtgccttgtggggttaaaattcctcctagtctttta
aatatttataaagaattaaaagcagatcttaatatagaaccttctaaaagcggggattta
agctcttgggcaaaacaaggagttttgctcttaaattctattcttagcgttgaagcggga
aaacctgcaagtcatagctcgtggggttggcaagaatttagtgatgctataatacataaa
ttaagtaatgaaaaatcaggacttgtttttatgctttggggaaattacgcaaaaagcaag
gagattttgattgataatgctaagcatttgattttaaaagcagcccacccaagcccttta
gctagaacaggatttttaggttgtaagcatttttcaaaggctaatgaatttttaaaaaaa
gttgataaaattcctatagattggaaaatagtttaa
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