Campylobacter coli RM4661: YSS_01410
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Entry
YSS_01410 CDS
T03166
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YSS_01410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_01410
Enzymes [BR:
ccy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
YSS_01410
DNA repair and recombination proteins [BR:
ccy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YSS_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
WHD_KicB
DUF382
FapA
Sec20
Motif
Other DBs
NCBI-ProteinID:
AHK76242
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All DBs
Position
275739..276902
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AA seq
387 aa
AA seq
DB search
MKVSELNLKAKALLETHLNDIVLSGELSKITMHGSGHWYFDLKDEKSSIACAMFKGANLK
VDFQPKVGDFLELVGSVSLYAESGRYQFIASSMKKAGMGDLEAQFLALKERLQKEGLFNS
EYKKTLPQFPKKIGIITSKTSAALQDMLKLINQKEYFLAKIYVFNALTQGSGAAYSLIQA
LKKADEIGLDVIIIARGGGSREDLFCFNDEGLAREIFKAKTPIISAIGHEIDYVISDFVA
DFRAPTPSAAIDTLLYSRLDLEQGLDLLEEKLTKLWESKLEHCENLLSNLHKFFKAKSLE
TMIEVKEKQLAFLLKQAKIIIESKIQKAELELQKLQNAFFQHENFFKKSKNLISIKKNGK
IANLEELKSEDIITLSSQTLQKEAKIL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaagcgaattaaatttaaaagccaaggctttattggaaacacatcttaatgat
attgttttaagcggagagctttcaaaaatcaccatgcacggatcaggacattggtatttt
gatctaaaagatgaaaaatcaagtatagcttgtgctatgtttaagggtgcaaatttaaaa
gttgattttcagcctaaggtgggtgattttttagagcttgttggaagtgtgagtttgtat
gctgaaagtgggcgttatcaatttattgcaagtagtatgaaaaaagcgggaatgggagat
ttagaggctcaatttctagcattaaaagagcgcttgcaaaaagaaggattgtttaatagt
gagtataaaaaaaccttgcctcaattccctaaaaaaatcggaatcatcacttcaaagact
tcagcggccttgcaagatatgttaaaacttatcaatcaaaaagaatattttctagctaaa
atttatgtttttaacgcacttacgcaaggaagtggcgcagcttattctttgattcaagct
ttaaaaaaagctgatgagataggattagatgttatcattatcgctagagggggtggtagc
agagaggatcttttttgttttaatgatgagggcttagcaagggaaatttttaaagctaaa
acacctattatttcggcaattggtcatgagattgattatgtgatcagtgattttgtagct
gattttagagcacccactccatcagctgctatcgatactttgctttattctagacttgat
ttagaacaaggacttgaccttttggaagaaaaattgacaaagctttgggaaagtaaatta
gaacattgtgaaaatttactcagcaatctacacaaattttttaaagcaaaatctttagaa
actatgatagaggtaaaagaaaaacagcttgcatttttgcttaagcaagcaaaaatcata
atagaaagcaaaattcaaaaagctgaattagaactgcaaaaactccaaaatgcttttttt
cagcatgaaaatttttttaaaaaaagcaaaaacctaatttccattaaaaaaaatggtaaa
atagcaaatttagaagagctaaaaagtgaagatatcatcactttgagttctcaaacttta
caaaaagaagcaaaaattctataa
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