Campylobacter coli RM4661: YSS_02110
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Entry
YSS_02110 CDS
T03166
Name
(GenBank) type III restriction endonuclease subunit R
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YSS_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_02110
Enzymes [BR:
ccy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YSS_02110
DNA repair and recombination proteins [BR:
ccy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YSS_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DAP3
RecG_dom3_C
SWI2_SNF2
AAA_22
DUF8091
AAA_30
ATPase_2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHK76367
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All DBs
Position
408163..409977
Genome browser
AA seq
604 aa
AA seq
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MKIKENDFDFFKKLKIKSAIDLALILPKKIENLSPSKTPKENELCTQKIIIKSIHSKKGQ
LFGLGFCKEWSQDISFVFFHPRAWHFGICKIGKELILNAKLTRFGHVWQFNNPKILTSFA
GFTPKYQIQGLQDKKISEFMHKYLNYENLKESGIEDKYIHFLLNLHTYDEKSFLMFENLE
RFEKDLKYIEIYNFLKRLKAKKTHFKAHQINVFNIANWLKDLPFSLTKDQLNALKDIEKD
LHSKEAKRRVIMGDVGCGKTLVLLGAALMVYPKQAILMAPTSILANQLYEEAKKLLPEFV
DILFIKGGKKEKDLEEKIKKANLIIGTHALIHLQSHNAVLVMIDEQHRFGSAQRQQIYSL
NENELAPHFIQFSATPIPRTLSMIQSELLNFSFIKEMPFKKDITTLCIQNEGFAKLSEKI
KEEIAQNHQIIIIYPLVNPSDKIPYLSLEQAKEYWQSHYEKVFVTHGKDKQKDEILERFR
DEGNILLSTTVVEVGISLPRLSTIVIVGAERLGLATLHQLRGRVGRVGLKSTCYLYTKLK
EIPSRLKEFASTLDGFKIAELDLKNRLSGDLLDGFIQHGNEFKYFDFSKDEYILEKAKKD
LMEI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaagaaaatgattttgatttttttaaaaaattaaaaattaaaagcgcgatt
gatttagcgcttatcttacctaaaaaaatcgaaaatttaagtccaagcaaaacacctaaa
gaaaatgagctatgcactcaaaaaataatcattaaaagcattcattcaaaaaaaggtcag
ctctttggtttgggattttgtaaagaatggagtcaagacatttcctttgtattttttcat
cctagggcctggcactttggaatttgtaaaataggcaaagaacttattttaaatgcaaaa
cttacgcgttttggccatgtttggcaatttaacaatcctaaaattttaacttcttttgca
ggttttactccaaaatatcaaattcaaggtttacaagataaaaaaatctctgaatttatg
cataaatatcttaattatgaaaatttaaaagaaagtgggattgaggataaatatatccat
tttcttttaaatttacacacttatgatgaaaaaagttttttgatgtttgagaatttggag
cgctttgagaaagatttaaaatatatagaaatatataattttttaaagcgtttaaaagct
aaaaaaacgcattttaaagctcatcaaatcaatgtttttaatatagctaattggcttaaa
gatttgcctttttctcttactaaagatcagcttaacgccttaaaagacatagaaaaagat
ttacactcaaaagaagccaaaaggcgtgtgattatgggggatgtaggctgtggcaagact
ttggttttgttgggcgctgctttgatggtgtatccaaaacaagctatcttaatggctcct
actagcatacttgccaatcaactctatgaagaggcaaaaaagcttttgcctgaatttgtg
gatattttatttattaaagggggtaaaaaagaaaaagatttggaagaaaaaattaaaaaa
gccaatttgattataggaacccatgcgctcattcaccttcaaagtcataatgctgtgctt
gtaatgatagatgagcagcatcgctttggctctgcgcagcgtcagcaaatttattcttta
aatgaaaatgaattagccccacattttatacaattttctgcaactcccattccaagaact
ttaagcatgatacaatcagaacttttaaattttagttttatcaaggaaatgccttttaaa
aaggatatcaccactctttgtatacaaaatgaaggttttgcaaagcttagtgaaaaaatc
aaagaagaaatcgcacaaaatcatcaaatcatcatcatctatcccttagtcaatccaagc
gataaaattccttatctttctttagaacaggccaaagaatattggcagagtcattatgaa
aaagtttttgtaactcatggaaaagataaacaaaaagatgaaattttggagcggtttcgt
gatgagggaaatattttattaagcaccacagtcgtagaagtaggaatttcattgccaagg
cttagtactattgttattgtaggagcggagcgcttaggccttgctaccttgcatcaactt
cgcggacgcgtgggtcgtgtcggacttaaaagcacttgttatctttatacaaaactcaaa
gaaattccaagtcgtttaaaagaatttgctagtactttagatggttttaaaatcgcagaa
cttgatcttaaaaatcgtttgagtggagatttgctcgatggatttatccagcatggaaat
gaatttaaatattttgatttttccaaagatgaatacattttggaaaaagcaaaaaaagat
ttgatggaaatataa
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