Campylobacter coli RM4661: YSS_03085
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Entry
YSS_03085 CDS
T03166
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YSS_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_03085
Enzymes [BR:
ccy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YSS_03085
DNA repair and recombination proteins [BR:
ccy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YSS_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
PriA_C
PriA_3primeBD
nSTAND3
AAA_19
AAA_30
PhoH
zf-C3HC4_3
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AHK76549
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Position
601890..603728
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AA seq
612 aa
AA seq
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MRYYELAVFGFYLQNLTFHSKEEIPALREVIIDLKNKKNLRALVLKECQKPEFQTKEIKE
ITSFSLSDIQFELAKFISYYYSSKLGFVLGLFSTHQTYTCDLIKIENEPKLSQKQKEALE
FIKANPTSLLFADTGSGKTEIYICLIKQYLEQGKQVLLLMPEISLTPQMQKRLEVYFKDK
FFLWHSKISKKKKQENLERFCKGEALLVAGARSALFLPFVNLELIIVDEEHDNSYKASNQ
PYINARDLALFLSSKFDIKVLLGSATPSLTSFYKQKSFRLKGTFFESKKHFLYDENELGV
TPMLLGELQKSLENQKQAIIFLPTKANFRQIVCKDCGQTIKCPFCSIAMSLHKKRNVLKC
HYCNYTSLIEQNCPSCQGVMLEARKMGTAELQELLQETLPLARIAKFDSDEITSIRKLNA
ILKDFNENKIDILIGTSMLAKGHDYHSVDLSVILGLDEYLFRPNFKASEETLALAMQVAG
RAGRKGEARVLLQTKNRAFFERYIEDYDAFLKDELENRKDLYPPFKRLLRVLIEDKDQKN
AQKLCEKLAYQFKNIKQVELVGYGICGVEMLHGKYRFYLLLRSENYKALVAIENYILQFK
NVSADIDPIDFI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagatattatgaattagcggtttttggattttatttgcaaaatttaacctttcatagc
aaggaagaaattccagctttaagagaggtgattattgatttaaaaaataaaaaaaatctt
agagctttagtattgaaagaatgccaaaagcccgaatttcagacaaaagagattaaagaa
attacatctttttcattaagtgatatacaatttgaattggcgaaatttatttcgtattat
tattcttcaaagctaggttttgtattaggacttttttctactcatcaaacttacacttgt
gatctgattaaaatagaaaatgaacccaaattaagccaaaaacaaaaagaagctttggaa
tttataaaagctaatcccacttctttgctttttgcagatacaggtagtggaaaaactgaa
atttatatttgcttaataaaacaatatttagagcaaggcaaacaagttttacttttaatg
ccagaaatttctcttactccacagatgcaaaagcgtttagaagtgtattttaaagataaa
ttttttctatggcattctaaaatttcaaagaaaaaaaagcaagaaaatttagagcgtttt
tgtaagggtgaagcacttttggtcgcaggagcaagatcggctttgtttttgccttttgta
aatttagaacttatcatagtagatgaagaacatgataattcttacaaagcgtctaatcaa
ccttatattaacgctagggatttagcactttttttaagctcaaaatttgacattaaggtg
cttttaggttctgctactccttctttaacgagtttttacaagcaaaagagttttagactt
aagggtactttttttgaaagtaaaaaacactttttatatgatgaaaacgaattgggcgta
actcctatgcttttgggcgagttgcaaaaaagcttggaaaatcaaaaacaagctatcatt
tttttgcccactaaggccaattttagacaaattgtgtgtaaagattgtgggcaaactata
aaatgtcctttttgctctattgctatgagtttgcacaaaaaaagaaatgttttaaaatgt
cattattgtaattacacttctttaatagagcaaaattgtcctagctgccaaggtgtgatg
ctagaggctaggaagatgggcacagcagaattacaagaacttttgcaagagactttgcct
ttagcaaggatagctaaatttgatagtgatgagattacgagtattcgaaagcttaatgct
attttaaaagattttaatgaaaataagatcgatatacttataggaacttccatgcttgct
aaaggacatgattatcatagtgtagatttaagcgttattttaggacttgatgagtatttg
tttcgtcctaattttaaagcaagtgaagaaactttagctttagctatgcaagttgctggt
agggcagggcgtaaaggcgaagcaagagtgcttttacaaacaaaaaatagagcttttttt
gaaaggtatatagaggattatgatgcttttttaaaagatgagttagaaaatagaaaagat
ctttatcctccatttaaacgccttttaagagttcttatagaagataaagatcaaaaaaat
gcacaaaaactttgtgaaaaacttgcctatcaatttaaaaatatcaaacaagtagaatta
gtaggctatggaatttgtggagttgaaatgctgcatggaaaatatcgtttttatttatta
cttagaagtgaaaattataaagctttagtggcaattgaaaattatattttgcaatttaaa
aatgtaagtgcggatattgatcctattgattttatatga
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