Campylobacter coli RM4661: YSS_04135
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Entry
YSS_04135 CDS
T03166
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccy
Campylobacter coli RM4661
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccy03016
]
YSS_04135
Enzymes [BR:
ccy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
YSS_04135
Transfer RNA biogenesis [BR:
ccy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSS_04135
Prokaryotic type
YSS_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WH_Rok
Motif
Other DBs
NCBI-ProteinID:
AHK76744
LinkDB
All DBs
Position
788213..788935
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AA seq
240 aa
AA seq
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MKLKIIFSYDGSKFLGSATQPHKKSVQDALQDALSHLGIFSSVLMASRTDKGVHASYAVA
CVECGEHFRDLNYLKKQINKFSHPFIHVKNLKIMPSNFEVRYDVKSREYRYIFYHGAYNP
FLASYVHFYPFIDVLKADLVLQNFVGIKDFKFFCKSGGDNKTTIREIFLAKAYSYKDFTI
FRFKANGFLRAQIRLMVASVLKVLENKMSIEELKEQIEAKKQYNHFLAPPCGLYLSRISY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaaattattttttcctatgatggatcgaaatttttaggttcagctacccaa
cctcacaaaaaaagcgttcaagatgccttgcaagatgccttaagtcatcttggaattttt
tcctctgttttgatggcttctcgcacagataaaggggtgcatgcaagctatgctgttgct
tgcgtggaatgcggggagcattttagggatttaaactatcttaaaaaacaaatcaataaa
ttttctcatccttttatacatgttaaaaatttaaaaatcatgccttcaaattttgaagta
agatacgatgtaaaaagtagagaatatcgctatattttttatcatggagcttataatcct
tttttagcttcttatgttcatttttatccttttattgatgttttaaaggctgatcttgtt
ttgcaaaattttgtaggtattaaggattttaaattcttttgcaagagcggaggagataat
aaaacgactatcagagaaatatttttagctaaagcgtattcttataaggattttaccatt
tttcgttttaaggctaatggttttttaagggcgcaaataagactaatggttgcgagtgtt
ttaaaagttttagaaaataagatgagtatagaagagctaaaagagcaaatcgaagctaaa
aaacaatacaatcattttttagccccgccttgcggactttatctgagtagaatttcttat
tag
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