Campylobacter coli RM4661: YSS_05560
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Entry
YSS_05560 CDS
T03166
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccy
Campylobacter coli RM4661
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccy03032
]
YSS_05560
03400 DNA repair and recombination proteins [BR:
ccy03400
]
YSS_05560
Enzymes [BR:
ccy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YSS_05560
DNA replication proteins [BR:
ccy03032
]
Prokaryotic type
DNA Topoisomerases
YSS_05560
DNA repair and recombination proteins [BR:
ccy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YSS_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHK76980
LinkDB
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Position
complement(1026851..1029418)
Genome browser
AA seq
855 aa
AA seq
DB search
MENIFNKDSDIELIDIENSIKSSYLDYSMSVIIGRALPDARDGLKPVHRRILYAMNDLGV
GSRSAYKKSARIVGDVIGKYHPHGDIAVYDALVRMAQDFSMRYPSIDGQGNFGSIDGDGA
AAMRYTEARMTILAEELLRDIDKDTVDFVPNYDDSMSEPDVLPARVPNLLLNGSSGIAVG
MATNIPPHSLNELVDGLLYLLDHKDASLEDLMQFIKGPDFPTGGIIYGKKGIIEAYRTGR
GRVKIRAKTHIEKKSNKDIIVIDELPYQTNKARLIEQIAELVKEKQIEGISEVRDESDRE
GIRVVIELKREAMSEIVLNNLFKSTTMESTFGVIMLAIHNKEPKIFSLIELLNLFLNHRK
TVIIRRTIFELQKARARAHILEGLKIALDNIDEVIALIKNSPDNTTARDSLVAKFGLTEL
QANAILDMKLGRLTGLEREKIENELAELMKEIARLDEILKSETLLENLIRDELKEIKSKF
DVPRITQIEDDYDDIDIEDLIPNENMVVTITHRGYIKRVPSKQYEKQKRGGKGKLAVTTY
DDDFIESFFTANTHDTLMFVTDRGQLYWLKVYKIPEGSRTAKGKAVVNLINLQADEKIMA
IIPTTDFDENKSLCFFTKNGIVKRTNLSEYQNIRSVGVKAINLDENDELVTAIIVQRDEN
EETGLLDDDSLNDENTNSDENLIESFKGKMLFAVTKKGMCIKFPLAKVREIGRVSRGVTA
IKFKEKNDELVGAVVIENDEQEILSISAKGIGKRTNAGEYRLQSRGGKGVICMKLTDKTK
ELISVVIVDESMDLMALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVENDEVVSIAKCPKE
ELEDEISDENLDLNL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagaatatttttaataaagattctgatattgaacttatagatatagaaaattctatt
aaaagtagttatttagattattctatgagcgttattatcggtcgtgcacttcctgatgct
agagatggcttaaagcctgttcacagaagaatactttatgctatgaatgatcttggcgta
ggaagtagaagtgcatataaaaaatctgctcgtatagtaggggatgttatcggtaagtat
catccacatggcgatattgctgtttacgatgccttagtaagaatggcacaagatttctct
atgcgttatccaagtatcgatggacaaggaaactttggttccatcgatggtgatggcgct
gctgcaatgcgttatactgaagctagaatgacaattttagcagaagagcttttacgcgat
atagataaagatacggtagattttgttccaaactacgatgattctatgagtgagcccgat
gttttacctgctagggtgccaaatttattattaaatggctctagtggtattgctgtaggt
atggcgacaaatattcctccgcatagtcttaacgagcttgtagatggacttttgtatttg
cttgatcataaggatgctagtttagaagatttgatgcaatttatcaaaggtcctgatttc
ccaacgggtgggataatttatggcaaaaaaggcattatcgaagcttatcgcacagggcgt
ggtagagtaaaaataagagctaaaactcacatagaaaaaaaatccaataaagacattatc
gttatagatgaacttccatatcagactaataaagcaagactcatagagcaaattgcagag
cttgtaaaagaaaagcaaatcgaaggaatttcagaagttagagatgagagtgatagagaa
ggaattcgtgttgtaatcgaactcaagcgtgaggcgatgagtgagatagtgcttaataat
ctttttaaatctactacaatggaaagtacttttggtgtgattatgcttgctattcacaac
aaagagccaaaaatcttttctttaattgaacttttaaatcttttcttaaaccatagaaaa
acagtgattatcagacgaacaatttttgaacttcaaaaagcaagagcaagagctcacatt
ttagaaggtttaaaaatagctttagataatattgatgaagttatagctttgattaaaaat
agtcctgataatactacagcaagagattctttggtagctaaatttggacttaccgagctt
caagctaatgcgattttagatatgaaactcggccgtttaacaggacttgaaagagaaaaa
attgaaaatgaacttgcagagcttatgaaagaaatcgcaagacttgatgagattttaaaa
agtgaaactttgctagaaaatcttatccgcgatgaattaaaagagataaaaagcaaattt
gatgtgccgcgtattacgcaaatagaagatgattatgatgatattgatattgaagatttg
attcctaatgaaaatatggttgtaaccattactcatcgtggatacattaaaagagtgcca
agtaaacaatacgaaaaacaaaaacgcggtggaaaaggcaagcttgctgtaacgacttat
gatgatgattttatcgaaagtttctttactgctaatactcatgatacattaatgtttgtt
actgatagaggacagctttattggttgaaagtttataagatacctgaaggctcaagaaca
gctaaaggaaaagcggttgttaatttgattaatttacaagctgatgaaaaaatcatggct
atcattccgactactgattttgatgaaaacaaatccttatgtttctttactaaaaatggt
atagtaaaacgcaccaatttaagtgaatatcaaaatatcagaagtgtgggtgtaaaagcg
attaacttagatgaaaatgatgaattagttactgctattatcgttcaaagagatgagaat
gaagaaacaggacttttagatgatgacagtcttaatgatgaaaatacaaactctgatgaa
aatttaattgaatcctttaagggtaaaatgctctttgcagtgactaaaaagggtatgtgt
attaaatttcctcttgcaaaagtgcgtgagattggtcgcgtaagtcgtggggtaacagct
attaagtttaaagagaaaaatgacgaattagtaggtgctgttgttatagaaaatgatgag
caagagattttaagtatcagcgctaagggtataggaaagcgaacaaatgcgggagaatat
agacttcaaagcagaggcggaaaaggtgtcatttgtatgaagttaaccgataaaaccaaa
gagcttattagcgttgtaattgtagatgaaagtatggatttaatggcactaacaagcagt
ggtaaaatgatacgcgttgatatgcaaagcattagaaaagcggggcgtaataccagtggt
gttattgtggttaatgttgaaaatgacgaggtggttagcatcgctaaatgtcctaaagaa
gagcttgaggatgaaataagcgatgaaaacttagatttaaatttataa
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